| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3787 |
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| Symbol | |
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| ID | 3936267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3871436 |
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| End bp | 3872182 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906165 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_511729 |
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| Protein GI | 89056278 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGGCC GACGCCTTGA AGATCGCGCC TGCATCGTGA CCGGTGGCGC GAAGGGCATG
GGGCTTGAAT TCACCCGCGC CCTGTTGGCC GAAGGCGCGC AGGTGCTGGC CGCCGATATT
GCGCCGGGGC AGGAGGCAGA GGCGGCAGGA GCCACCTATA TCAACGCCGA TATCACTGCA
TCAGACGGTC CGGAGCGGAT TGTGAAAGCC TGCCGCGACA CTTTCGGCAG CCTGGACGTG
CTGGTCAACA ATGCAGCCCT TTATGCCACG CTTCCGGTGG CACGATATGA CGATATCGAC
ACCGCGACAT GGGCCCGTGT GATCGATACC AATGTGACCG GCACCTATGG GATGATCCGC
GCGGCAGGTC CGGTGATGGA GGCGCAGGGC CACGGCAAGA TCGTCAACAT TACGTCCGGC
ACCGTCTACA AGGGGATGCC GGGCATGCTG CATTACATCG CGTCCAAAGG CGCGATCCAT
GCGATGACCC GCGCCCTGTC GCGGGAATTG GGCGACGCGG GGATCTGTGT CAACAATCTT
GCACCGGGCC TGACGCTGTC GAGCAGTGTC CTTGAGAATG CGGATCATGT CGACGCCGCG
CGCGCCGCCG TCCTCGCGTC GCGGGCGATC AAGCGGGACG GTCACCCGGC TGACCTGTTG
GGCGCGCTGG TCTTCCTGTG CTCGGGCGAA AGCGATTTCG TGACTGGCCA GACGATCGCT
GTCGATGGCG GATCCGTTAA CACCTGA
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| Protein sequence | MRGRRLEDRA CIVTGGAKGM GLEFTRALLA EGAQVLAADI APGQEAEAAG ATYINADITA
SDGPERIVKA CRDTFGSLDV LVNNAALYAT LPVARYDDID TATWARVIDT NVTGTYGMIR
AAGPVMEAQG HGKIVNITSG TVYKGMPGML HYIASKGAIH AMTRALSREL GDAGICVNNL
APGLTLSSSV LENADHVDAA RAAVLASRAI KRDGHPADLL GALVFLCSGE SDFVTGQTIA
VDGGSVNT
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