Gene Jann_3781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3781 
Symbol 
ID3936261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3865487 
End bp3865981 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content60% 
IMG OID637906159 
ProductMarR family transcriptional regulator 
Protein accessionYP_511723 
Protein GI89056272 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAAT CTCTTTTTCC CGGCTACGCT TCGGTCATGA AATTAATCGA CATCCTCGAC 
GCCACGCCCT TCCCGATCGG CTACCGTATC GCGTTTCTTA CCAACTTCTG GCGCGAGCCG
CTTTTGCGCC GGATGGAGCG TACCACTGGT CTGATCCGGC CGGAACTCAC GGTTTTGATG
TGCTTGAATT TTCAGCGCGA CCTCCATGCA CGTGACATCT GCGAGATCAC CGAGCAGCCG
TCAAACACCG TCAGCCGCGC CGTGTCCTCG CTTGAGAAAA AGGGGTATCT GTCGCGCCAG
CGCGACCATC TGGACACCCG GCGGCAGGTC CTGAACACGA CGGCGGAGGG CACGGACGTG
CATGACGGCA TCATGGAGAG CTTTGCCGTA GCGGAGGCGC GGATGCTGGA CGTTCTGAGC
CAGCAAGAGC GTGTGGTTCT TGAGGGCCTG CTGGATAAGC TGGCGCGCAG TGTCGAGGAT
TGGCGCGTCG CATAG
 
Protein sequence
MEQSLFPGYA SVMKLIDILD ATPFPIGYRI AFLTNFWREP LLRRMERTTG LIRPELTVLM 
CLNFQRDLHA RDICEITEQP SNTVSRAVSS LEKKGYLSRQ RDHLDTRRQV LNTTAEGTDV
HDGIMESFAV AEARMLDVLS QQERVVLEGL LDKLARSVED WRVA