Gene Jann_3746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3746 
Symbol 
ID3936226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3828284 
End bp3828736 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content61% 
IMG OID637906124 
ProductCMP/dCMP deaminase, zinc-binding 
Protein accessionYP_511688 
Protein GI89056237 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.900765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG ATGCAATTTG GACCGCACGG TTCATGGGGC TCTGCGATCA CATAGCCTCC 
TGGTCCGAGG ATCGCGACCG CCACGTGGGA TGTGTTATCG TCGGTCCGCA AGGCAACGAG
GTCCGCGCAA CCGGCTACAA CGGCTTGCCG CGCGGGGTCT CTGACACAAA TGAAGCGCGG
TTTGATCGGG CGAGTGGAGA GAAGTTCTTC TGGGGCGAAC ACGCGGAGCG CAACGCGATA
TATAATGCCG CGCGCATCGG CGTGTCGTTG CAAGGCTGCA CGATCTACGT AAACCGTTTC
CCCTGCGCCG ATTGCGCCCG TGCGATCATC CAATGTGGCA TCGAACGGGT GGTCAGCCCG
CCGATCCCCG AAGCAGACGG TGCGCTCGAC TATAGTTTCC AGGTGTCCAA GAAGATGTTG
GAGGAAGCGG GCATCAGCGT AGCCCACCCG TGA
 
Protein sequence
MADDAIWTAR FMGLCDHIAS WSEDRDRHVG CVIVGPQGNE VRATGYNGLP RGVSDTNEAR 
FDRASGEKFF WGEHAERNAI YNAARIGVSL QGCTIYVNRF PCADCARAII QCGIERVVSP
PIPEADGALD YSFQVSKKML EEAGISVAHP