Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3746 |
Symbol | |
ID | 3936226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3828284 |
End bp | 3828736 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637906124 |
Product | CMP/dCMP deaminase, zinc-binding |
Protein accession | YP_511688 |
Protein GI | 89056237 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2131] Deoxycytidylate deaminase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.900765 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGACG ATGCAATTTG GACCGCACGG TTCATGGGGC TCTGCGATCA CATAGCCTCC TGGTCCGAGG ATCGCGACCG CCACGTGGGA TGTGTTATCG TCGGTCCGCA AGGCAACGAG GTCCGCGCAA CCGGCTACAA CGGCTTGCCG CGCGGGGTCT CTGACACAAA TGAAGCGCGG TTTGATCGGG CGAGTGGAGA GAAGTTCTTC TGGGGCGAAC ACGCGGAGCG CAACGCGATA TATAATGCCG CGCGCATCGG CGTGTCGTTG CAAGGCTGCA CGATCTACGT AAACCGTTTC CCCTGCGCCG ATTGCGCCCG TGCGATCATC CAATGTGGCA TCGAACGGGT GGTCAGCCCG CCGATCCCCG AAGCAGACGG TGCGCTCGAC TATAGTTTCC AGGTGTCCAA GAAGATGTTG GAGGAAGCGG GCATCAGCGT AGCCCACCCG TGA
|
Protein sequence | MADDAIWTAR FMGLCDHIAS WSEDRDRHVG CVIVGPQGNE VRATGYNGLP RGVSDTNEAR FDRASGEKFF WGEHAERNAI YNAARIGVSL QGCTIYVNRF PCADCARAII QCGIERVVSP PIPEADGALD YSFQVSKKML EEAGISVAHP
|
| |