| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3630 |
|---|
| Symbol | |
|---|
| ID | 3936108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3704317 |
|---|
| End bp | 3705246 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637906006 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_511572 |
|---|
| Protein GI | 89056121 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.153402 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTGCATTG CGCGCGTCCG CGTCCACAGG GCTTTCCCCG CACAGACAAG CGCGATAGGC
GAGGTGGCGA TGGATAGCAC AACACTTCGC GCGCTGCCGT TGATGCTGGT GGCCATGGCG
CTGATCCCTT TGGGCGATAC GGCGGGCAAA TTGCTGACCG CAGCCCCCCT TGATGGGGGC
CAGGGCGTCG CACCGGTGTT TGTCGCCTGG AGCCGGTTTG CCCTGGGCGC GGGTTTTATC
GCGCCGTTCG TCCTGCGCCT GGTCAAGCCC CGCCTGTTCG CGGATTGGCG CATCTGGCTG
CGGGGCCTGA TGTTGGCCGG TGGCATCACG TCGATCCTGA CGGCGCTCAG CACCGAGCCC
ATCGCCAACG TATTCGGGGC GTTCTTTGTC GGGCCCATCC TGTCCTGGCT CCTGTCCGTT
TGGCTGCTGC GCGAACCGTT TTCGATCCTC CGCTTTGGCC TGATCTGCCT CGGGTTTGTT
GGGGTCATGC TGGTCGTCAA ACCGGGCTTC GGCATGACGT CGGGCATGGG ATTTGCGGTG
CTTGCAGGGC TATTTTATGG CGCGTATCTG GTGATGAGCC GCGCGATGGC CGACGTGGCG
CGTCCCCGCG CGATGCTATT CTCGCAACTG GTGATCGGCG CCGTGGTTCT GGCTGTGCCG
GGCGTATCGG CCATGCCGCC GGCCACGCTT CCGGTCGCGG CGCTCACCAT CGTCTCTGCG
ACCTGTTCCA TGCTTGGCAA TCTCTTGCTG ATCATGGCGT ATCGGACGGC GGAAGCCAGC
CGCATGGCGC CGTTCGTTTA CACGCAGCTG ATCTGGGCCA CGCTGCTAGG AGCCGTATTG
TTCGGAGCGG TACCGGACAT CTGGGCCTTG ACTGGCATTG CGCTTTTGCT GGTGTCGGGC
TTTGCATCTC TTGCGGTCCG GAGGAGATGA
|
|---|
| Protein sequence | MCIARVRVHR AFPAQTSAIG EVAMDSTTLR ALPLMLVAMA LIPLGDTAGK LLTAAPLDGG
QGVAPVFVAW SRFALGAGFI APFVLRLVKP RLFADWRIWL RGLMLAGGIT SILTALSTEP
IANVFGAFFV GPILSWLLSV WLLREPFSIL RFGLICLGFV GVMLVVKPGF GMTSGMGFAV
LAGLFYGAYL VMSRAMADVA RPRAMLFSQL VIGAVVLAVP GVSAMPPATL PVAALTIVSA
TCSMLGNLLL IMAYRTAEAS RMAPFVYTQL IWATLLGAVL FGAVPDIWAL TGIALLLVSG
FASLAVRRR
|
|---|
| |