| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3583 |
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| Symbol | |
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| ID | 3936058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3661652 |
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| End bp | 3662968 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905958 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_511525 |
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| Protein GI | 89056074 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.662735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG CCATTCTCCC CTCCGCAAAG GCCGAACTCG CGCCTCTGAT CCGTCTGTCG
GTGCCCCTGA TGGTCGGCCT GACGGCTGCG CTTTTGATCG GTGTGGTGGA CACGGTCATG
ATCTCGCCGC TCGGGACCGT CCCGCTTGCG GCGGCAGGCG TGACGACGGC GGTGCTGATC
ATCCTGATCT CGGCCCTTTG GGGGCTGCTC ACGGTGATCT CGGTCCAGAT CAGTCAGGCC
GATGGCGCGG CTGACCCGGC GCGCGTGGCG CTTGCGGTCC GCTCCGGTCT GCTGCTGTGC
CTGATCGGAG GAGTCCTGGG CGCCGGTCTC ATGCTGGCGG TCTACCCGCT CCTTCGTCCC
CTGGGCCAAC CGGAAGAGGT GCTCGCCATT CTCCTGCCCT ACTGGGCGGC GATGGCGCTC
TGGATCGTGC CCTTCACGCT GTTTTTCGGC CTCAAAGCCC TGTTCGACGC CGTCGACTGG
CCGTGGACAG CCGTCGGCCT CAGCTACATC GGGGTGCTGG TGAACATCCC CGCGAACTAC
ACCTTCATCC ATGTGCTGGA TATGGGGCTA CTGGGGGCGG GCTTGGCCTC CATTCTGTCG
CAAAGCCTCT CGCTGCTGGC CGCCTGGCTG GTCTTCACCC GGGCGCCGGG TCTGGCCGCG
TATCGCCAAA AGGTGGCCGT TGCCTGGGCC GACGTGCGCG CGCAGCTGAA GGACAGCGCG
CCTCTGTGCT TGGGGTACGC AGGCGAAGGC GGGGCCTACG CGATGATCGG TCTGATGATC
GGCTGGATCG GGGCGGAGGC GCTGGCCGCC CATCAGATCG TCAACGCGCT CGGCGGGGTG
GCCTATGTCA TCCCGCTCGG CATGGCAGGG GCCGTGTCGA TCCGTGTCGG CAACGCCGTC
GGTGCGGGCC AGATCGCGCG TCTGCGTTCG ATCCTGAAGG CCTCATTCCT GATGGTGGTG
CTTTGGCAGG CCCTGGCCGC GTTGGTGTTC ATATTCGGCG GACGGATCAT GGCCGAGGCG
ATGTCATCCG ACCCCGCTGT CATCCAATTG GCCGCAACGT TATTTATCGT GATGGCGATG
ATGCAGATCG CCGACGGTAT TCAGGGCACG TCGCTCGGGG CGCTGCGTGG CATGTCCGAC
ATGATCCGCC CGACGACAAT CACGTTGATC GCCTATTGGC CGCTCGCCTT GCCTGCAAGC
TACCTGCTTG GCATCACGCT GGACTTCGGC GCGATTGGGA TCTGGCTGGG ATACACGCTC
GGTCTGGCGG TCGCGGCTGT CGCCTTGCCG GTGCGGTTCT GGCGTCTCAC TGCTTGA
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| Protein sequence | MTTAILPSAK AELAPLIRLS VPLMVGLTAA LLIGVVDTVM ISPLGTVPLA AAGVTTAVLI
ILISALWGLL TVISVQISQA DGAADPARVA LAVRSGLLLC LIGGVLGAGL MLAVYPLLRP
LGQPEEVLAI LLPYWAAMAL WIVPFTLFFG LKALFDAVDW PWTAVGLSYI GVLVNIPANY
TFIHVLDMGL LGAGLASILS QSLSLLAAWL VFTRAPGLAA YRQKVAVAWA DVRAQLKDSA
PLCLGYAGEG GAYAMIGLMI GWIGAEALAA HQIVNALGGV AYVIPLGMAG AVSIRVGNAV
GAGQIARLRS ILKASFLMVV LWQALAALVF IFGGRIMAEA MSSDPAVIQL AATLFIVMAM
MQIADGIQGT SLGALRGMSD MIRPTTITLI AYWPLALPAS YLLGITLDFG AIGIWLGYTL
GLAVAAVALP VRFWRLTA
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