| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3516 |
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| Symbol | |
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| ID | 3935990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3571943 |
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| End bp | 3573787 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905890 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_511458 |
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| Protein GI | 89056007 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.510113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00329665 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAACGGAA AGATCTTGCG GATTTCGGTG GCGATGGCGC TTTGGATCGC ATCGCTGACC
GCGCTTTTGT TTGCCCTGAA TATCGGACGC GCCGTCCCTA TTGACGGGGC CCGGCTTATC
GAGACGGCCA CACTTTGCTC CGATCCCGCG CGACCTGCGA CCTGTGCGGA TATCTCTTTG
CCCTACCATT CCGAACGGCC AACTCAGGAT CGCACCCTCA CCCGGTATTT TGCCGTGGAC
ATCCCGTTGG ACCCTGCGAC GGAGGGCCTG CAGGCCCTCT ACCTGCCCAA ACTTGCAGAT
ACGGTCACAG TGACGCTCAA CGGCGAAACT CTGTTCGAGC CGCCCATGAA CCGCAGCCTG
GATAGTACGC CCGTGCTGAT CCCCATTCCG CCTGCTCTGC TAGACGACGA TATGGCGCGG
TTCGTCCTGA CGCTTCGGGG GGCCGCGCCG GAAGGGTTGG ACCTCTGGCC ATTCCATATC
GGCCCCCACG CGCACCTCGC CCCGGTCCAC GACACCCGCA TGAGTTTTGG GCCGGGCGTG
GCGCGGTTCT CCATGGGCAT CATGGCCGTA CTGGCGATTG CCCTGCTGTT GATCTGGTGG
AACCGCCGGG CCGAACGGCA CTATCTCTGG CTCGCGGCCT CCTGTCTCAG CGTGCTCTTC
ATCCTGACGC ACATCGCATT CGGCGCATCA ATTGGATCCT ACAAGATATG GACGATCCTG
TGGTCGTTCT CGGCGGCGGT CTACGTCTTC ACCATCCTGA AGTTTCTACG TCACTTCCTG
TCGCTGCCCG TTCTGACGTT GGAAAGGGTA CACCTCAGCT CGATCCTGCT ATGTGCGCTC
GTCGCGCTTG TCTTGCCGGG GGGGTACACC TTCTCGGTCT CGCTCACCAT CAATGCGCTC
AGCGCCCCGT CCGCGCTGGC CGTCCTCGTG CTGCTGTGGA TGCGCCGGAC GGAGCTTGCA
GGGCGCGATT TTGCCGTGTT CTTCACCTGC ATGTCTATTG CGGTGACATT GGGTGTCTAC
ACCCTGACCA TTACGGCCTT GCCCAACACG CCGCGCAGCT TGCAACTGTA TCAGATCATG
CCGTTGGTCA TGTCATTTGC CTGCGTCTAT CTTATCCTGG CGAAATTCCT GCAAAGCCTG
CACGGATATG AGGCGTTGAC CACGTCCTTG AACCAGACCC TCGACCAACG CACCCGGGAA
TTGGAAGAGA GTTTCACCCG CCTTGCCCAG ACCGAAAAGC GAGAGGTGAT TGCCCAGGAA
CGCTCTCGCA TCATGCTGGA TCTGCATGAC GGGTTGGGCG GTCAGTTGGT GAATACGCTG
GCCTATATTC GCCGCACGGG ATCAGGGGAT GACACGATCC GCCTGGCCTT GGAGGATGCG
TTGCGCGACC TTGCCATGAT GCTGGACAGT GTCGAAAGCC AGGAAAGCCT GGTGACCCTT
CTGGGCATGA TGCGCACGCG GCTGGAGGGT CTTTTGGCCG ACAACGGGAT CACATTCGAC
TGGCAAATCG GCGATGAGCC CGTGGCGCCC GTGTCCGGCC CCTCCCCCAA CCTGAACTTG
GCGCGGATCG TGCAGGAGGC GATTACCAAC GTGATCAAAC ACGCCGACGC GAGCGTGATC
CGCGTGGAAA CGGACGCGCG CACCATCTCC ATCAGCGACA ACGGCACGGG GTTCGATGCG
GAAGCCGGGC GCGCGGGGTC GCAGGGCCAC GGGATCTCCA ACATGCGGCG CCGGGCGGAG
GCATTGGGCG CCCGGCTGGA GATCGCATCA GACGCGTCCG GCACGCGGGT GTCACTCGCG
TTTCCTGACG CGGCTGCCCC CAAGCCCTGC TCCGATGCCG CGTGA
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| Protein sequence | MNGKILRISV AMALWIASLT ALLFALNIGR AVPIDGARLI ETATLCSDPA RPATCADISL
PYHSERPTQD RTLTRYFAVD IPLDPATEGL QALYLPKLAD TVTVTLNGET LFEPPMNRSL
DSTPVLIPIP PALLDDDMAR FVLTLRGAAP EGLDLWPFHI GPHAHLAPVH DTRMSFGPGV
ARFSMGIMAV LAIALLLIWW NRRAERHYLW LAASCLSVLF ILTHIAFGAS IGSYKIWTIL
WSFSAAVYVF TILKFLRHFL SLPVLTLERV HLSSILLCAL VALVLPGGYT FSVSLTINAL
SAPSALAVLV LLWMRRTELA GRDFAVFFTC MSIAVTLGVY TLTITALPNT PRSLQLYQIM
PLVMSFACVY LILAKFLQSL HGYEALTTSL NQTLDQRTRE LEESFTRLAQ TEKREVIAQE
RSRIMLDLHD GLGGQLVNTL AYIRRTGSGD DTIRLALEDA LRDLAMMLDS VESQESLVTL
LGMMRTRLEG LLADNGITFD WQIGDEPVAP VSGPSPNLNL ARIVQEAITN VIKHADASVI
RVETDARTIS ISDNGTGFDA EAGRAGSQGH GISNMRRRAE ALGARLEIAS DASGTRVSLA
FPDAAAPKPC SDAA
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