| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3404 |
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| Symbol | |
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| ID | 3935877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3455426 |
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| End bp | 3456346 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637905777 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_511346 |
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| Protein GI | 89055895 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGT CCCTCAAGGC GATGACCTAT TTCACAACCG CCCTGCGCCA CGGCAACATC
GCCCGGGCCG CCGCAGAGCT GAACATCGCA GCCTCCGCCG TCTCAACCGC CATTGATCAA
GTGGAGGCGG AATTCGACCT CACGCTGATC ACGCGCCACC GCGCCCGGGG CATTCAGGCC
AATGCCAACG GCAGGATCGT CGCCGGCAAA TGTGAGCGGT TGCTGGAGGA GTATCGCGCG
CTCCTGTCCG AGGGGGCGGA CCTGAAACAA GCGCTCGGCG GGCCGCTGCG GATCGGCTAT
TACGCGCCGA TCGCGCCTGC CTTTCTGCCC GCCGTTCTGG CGTCCTTTGT GCCCGACGCC
AGCCTTGTCG AGTTGACACT GGAGGATTGC GACAACGACA CGGCGCAGGA CGGGCTGCTG
TCGGGCAAAT ACGACGCGAT CCTGTTTGTA TCCGAAGACG TGCGCCCCGC CATCACCTAT
GACATCTTGA TCAAGGCCCC GCCCTATTGT CTGGTGCCCG CCGATCACGC GCTGGCCTCT
GCCCCCGCCG TCACCATGGC GCAGATCGCG CAAGAACCGC TGGTCGTGCT GAACCGGCCC
GTCGCGGCGG AGTATTACCG ACGGCTTTTT GACGGCCAGG GTGACGGTCC CTCAATTGCT
GCCTACGCCA CGTCGACGGA GATGGTGCGC AGCCTTGTCG GCGCGGGCCA TGGATGCGCG
GTCCTGAACA TGCGCCCGCA AACGTCGGTC AGCTATGCGG GGGAAAGCGT GGTCGCACGG
CCGATCTCGG ACCCATTGCC GCCGCTCACC CTATCCATCG GCTACGACAT GACCCGTCCG
CGCCGATTGG TGCAGCGCTT CGTGGCAGCG TGCCACGCCC ATTTCGCAAG GGACGGGCAG
GATCAATGCA TCGTCCGGTG A
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| Protein sequence | MALSLKAMTY FTTALRHGNI ARAAAELNIA ASAVSTAIDQ VEAEFDLTLI TRHRARGIQA
NANGRIVAGK CERLLEEYRA LLSEGADLKQ ALGGPLRIGY YAPIAPAFLP AVLASFVPDA
SLVELTLEDC DNDTAQDGLL SGKYDAILFV SEDVRPAITY DILIKAPPYC LVPADHALAS
APAVTMAQIA QEPLVVLNRP VAAEYYRRLF DGQGDGPSIA AYATSTEMVR SLVGAGHGCA
VLNMRPQTSV SYAGESVVAR PISDPLPPLT LSIGYDMTRP RRLVQRFVAA CHAHFARDGQ
DQCIVR
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