| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3342 |
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| Symbol | |
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| ID | 3935815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3394056 |
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| End bp | 3394811 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905715 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_511284 |
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| Protein GI | 89055833 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGCG CGCGTGCCCA TCCTGGTGCG ATCACAGAGC TTGCGGCACA TCTGCTTGCG
GCGGACGGGT TTGATGAGCG TGCTGTCATC CTGGACCGTG CCCTGGGGGC TTTGGGCGGC
GACTGGATCA ACATCGCCGA AGGGTCCGGC GACACGATGA TCCCCCATTG GTTCTACAGC
ACCCTTCCCG CCGACACGCT GACCGCATAC GCCAGCGATG CCCATTGGCG CCGCGACACG
ATTTACCGCA CCGCGATGCA ATCCACGCCC CAGGTCATCT GGAGCCAGAC AGGCCCGCGG
CCCGGCTCCG GCGCTGGCGA GGACGCCACG TTTGACACGT TCATCGGGGA CGCGGGGACG
AAGGCGATCG TCACCTACAC CCTGCAAAGC ACCCCTGTCG GGGATACGCG GGCGATCTCT
CTGATCTCGT CGCTGCCCAC CAAAGAGGTG TTTCAGCCCG CAAACCTCAG GGACATCGCG
GATACCATCC GGCTGATGTT GCCCTGGATG GATGCCAGCG CAACGCGTGA GACCGGGCGG
TTGGTGCCCT ACCCGGTGCG CCAGCTGTCG CAGCGGGAAC GGGAGGCCGT CACCCTTCTG
GCGGGCGGTT TGCAGACTGC GCGCATATCG GACGCGATGG GGGTGGCAGA GGTCACCGTT
CACAAACACA TCCGCAATGC CCGCCACAAA CTAGGCGCGC GAACACGGGA ACATCTGGTC
GCCGCGGCGA TCCGCAGGCG TCACATCGCG GTCTGA
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| Protein sequence | MAGARAHPGA ITELAAHLLA ADGFDERAVI LDRALGALGG DWINIAEGSG DTMIPHWFYS
TLPADTLTAY ASDAHWRRDT IYRTAMQSTP QVIWSQTGPR PGSGAGEDAT FDTFIGDAGT
KAIVTYTLQS TPVGDTRAIS LISSLPTKEV FQPANLRDIA DTIRLMLPWM DASATRETGR
LVPYPVRQLS QREREAVTLL AGGLQTARIS DAMGVAEVTV HKHIRNARHK LGARTREHLV
AAAIRRRHIA V
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