Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3313 |
Symbol | |
ID | 3935786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3367972 |
End bp | 3368271 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637905686 |
Product | sterol-binding |
Protein accession | YP_511255 |
Protein GI | 89055804 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3255] Putative sterol carrier protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00254715 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0577925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATC CAGTCATCGA CGCCGCAGTG GCCGCGTTGA GCGAAAAGAT GTCCGGGGCC GATTTTGACG GCACCGCGAA ATTTGTGATC GAAGGCGAAG GGGCCGTGAT CGTGGACGGC ACAGGCGTGC GCGCCGCCGA TGACAGCGAC CATGCCGACG TGACCATGTC CGCCGACGCC GATGTCTTTC AGGAGATCAT GGCAGGCGAT CTGAACCCTA CGGCGGCCTT CATGGGCGGC AAGCTGACGC TGGATGGCGA CATGGGCACG GCGATGAAGC TCGGGTCTGC CCTGAGCTGA
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Protein sequence | MSNPVIDAAV AALSEKMSGA DFDGTAKFVI EGEGAVIVDG TGVRAADDSD HADVTMSADA DVFQEIMAGD LNPTAAFMGG KLTLDGDMGT AMKLGSALS
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