| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3274 |
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| Symbol | |
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| ID | 3935747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3327573 |
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| End bp | 3328700 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637905647 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_511216 |
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| Protein GI | 89055765 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCCGC TGTTTTTGGG CTCCGAGATT TACCGTGGGT CCAGCTACGG GCGCTGGCAT
CCGCTGCGGG TGCCCCGGGT GTCTACGGTC ATGGATTTGA GCCGTGCGAT GGGCTGGTTG
GGGCCGGGCC AATACCGCAA CTCGCCCCGC GCCAAGCCCG CCGCCCTGCA TGTCTGGCAC
ACGCCCGCGT ATATTGCGGC GCTGCAACAG GCCGAAGCTG ATCAAGCCGT GACGGATGCG
GTGCGCGACC GCCACGGGCT CGGCACCGTC TCCAACCCGA TCTATCCGGA AATGTTTCGC
CGCCCCGCCA CGGCGGCGGG CGCGTCGCTG CTGGCCGGAG AGCTGTTGAA AGACGGTGGC
GTGATCTATC ACCCGGGCGG CGGCACGCAT CACGGGATGC GCGACCGGGC GGGCGGGTTT
TGCTACCTCA ACGACCCGGT CCTCGCCATG CTGTCGCTGC GCCGCAATGG CGCGCGGCGG
ATCGCCTACG TGGATATCGA CGCCCACCAT TGCGACGGCG TGGAAGACGC GTTTGCGGGC
GATCCCGACA CGCTCCTGAT CTCCGTCCAT GAGGAAAAGC GCTGGCCGTT CACCGGGGCT
CTGGAAGATG ACGGTGCAAC GCCGGGGGGC GTGGCCAATT GCCTGAACCT GCCGGTGCCA
CGCGACTTCA ATGACAGCGA AATGGCCGCG ATCCGCGACG ATCTGATTCT GCCATTTGTC
GCGCGGTTCC GGCCCGATGC CGTCGTGCTG CAATGCGGGG CCGATGCGGT GACGGAAGAC
CCACTAAGTC GCCTGACCCT GTCAAACAAC GCTCATTGGG CAATTTTGCG CGGGCTGATG
GACCTGCACC CGCCGCGCCT GCTGGTCCTG GGCGGTGGCG GCTACAACCC GTGGTCCGTC
GGGCGGTTGT GGACCGGGAT CTGGGCGACG TTGAACAGGC ATCCCATCCC GGATCGGGTC
CCGGCGCCGG CGGAAGATGT GCTCCGCGCG CTCAGGTGGG ACGGCGCGCG CGCGGGGCGC
AATCCGCCCG ATCACTGGTT CACCACCCTG CGCGATGCAC CCCGCCCCGG CCCGGTGCGG
CCAGAGGTGG CCCGGCGCGT GCGGCATCTG GCCCATCGGC GGATCTGA
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| Protein sequence | MRPLFLGSEI YRGSSYGRWH PLRVPRVSTV MDLSRAMGWL GPGQYRNSPR AKPAALHVWH
TPAYIAALQQ AEADQAVTDA VRDRHGLGTV SNPIYPEMFR RPATAAGASL LAGELLKDGG
VIYHPGGGTH HGMRDRAGGF CYLNDPVLAM LSLRRNGARR IAYVDIDAHH CDGVEDAFAG
DPDTLLISVH EEKRWPFTGA LEDDGATPGG VANCLNLPVP RDFNDSEMAA IRDDLILPFV
ARFRPDAVVL QCGADAVTED PLSRLTLSNN AHWAILRGLM DLHPPRLLVL GGGGYNPWSV
GRLWTGIWAT LNRHPIPDRV PAPAEDVLRA LRWDGARAGR NPPDHWFTTL RDAPRPGPVR
PEVARRVRHL AHRRI
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