Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3270 |
Symbol | |
ID | 3935743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3324666 |
End bp | 3325850 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637905643 |
Product | hypothetical protein |
Protein accession | YP_511212 |
Protein GI | 89055761 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCCGGGC GCACCATTGT CACGATGATG AAGGATGAGG CGCCCTTCCT GCTGCATTGG ATCGCGCATC ACCGGTTGAT CGGGTTCGAC CGGATCGTCG TTTTCACCAA CGATTGCAGC GATGGCACCG ACGCGATGCT GGATCGGTTG GAGAGGATGG GAGAGGTCAC CCATCGCCGC AACACGGTTC CCGATGGCGG CAAGCCACAA CCGCTTGCAT TGCGCCGCGC AGGGAAACTG GCGGAGGTTA CGGGAAGCGA CTGGCTGATC GCGCTGGATG TGGACGAATA TGTCCACGTG AAGGTCGGGG GCGGGCATCT GGATGATCTG CTGGCGACCG CGCCCGAGGC CGACGGCGTC GCGCTGACCT GGCGGATGAT GGGGTCCAAT GGCCTGACGG GCTGGACCGA CACCCCGGTG ACGGAGGCCT ATACCCGCGG CGCACCGGAT CTGTTTCGCA AGGGCTGGGG CGTGAAGACG CTGTTCCAAC CCTTCGATCA GATGAAACTT GGCATCCACC GCCCCACCGT GAAGGGCCGC GACAAGGCGG CGTTGGCGCA GCGGGCCTGG GTCAACGGCT CAGCCAAGCC GATGACGCGC GGGTTTATGG AGGGGATGTG GCGCTCGTCC CTCGCAACGC TCGGTTATCG CCACGCGGAA ATCGCCCACT ACGCCACCCA GTCGCAGGAG GCCTTCCTGC GCCGTGCCGC ACGCGGCAAC GTTAATGCCA AGCCCGACAA GTACAACGCC ACCTATTATG GGATGTTCGA TCGCAATGAG ACGGCGCAAA CCGGGCTTCT GACCGCTGCC GAGGCCACCC GTGCGCGGGT GACGGGCTAC CTCTCCGACC CCGCGCTCAG CGCGCTCCAT GACCGCGCGA TGAACTGGCA CGCCCTGGCG CGGGAGGCGA TGCGCGCGCG GGCCTCTCAC GCCGCTGACC TGGCCGCCCT GAACACGGCA GCCGTCATCC CCTTCGCGGC GTTGGATGAC GTCCTCTTCC CGCAACCCCT TGCGCCAGAA GGCAAAGCCA TGGTCGCCCG GATGCAAGCC CAGGGGGTGC CGGACCTTCA GATCGCCCGC GCCGTCGCCC AATCTGTGCA GAAGCTGGAG GCCCTCCGTG ATGCCCGGGA TGCGGCCGAG TTGAACGCCA TGGGTGTCAC GCCGGACCAC GAACGCTGGG GCTAG
|
Protein sequence | MAGRTIVTMM KDEAPFLLHW IAHHRLIGFD RIVVFTNDCS DGTDAMLDRL ERMGEVTHRR NTVPDGGKPQ PLALRRAGKL AEVTGSDWLI ALDVDEYVHV KVGGGHLDDL LATAPEADGV ALTWRMMGSN GLTGWTDTPV TEAYTRGAPD LFRKGWGVKT LFQPFDQMKL GIHRPTVKGR DKAALAQRAW VNGSAKPMTR GFMEGMWRSS LATLGYRHAE IAHYATQSQE AFLRRAARGN VNAKPDKYNA TYYGMFDRNE TAQTGLLTAA EATRARVTGY LSDPALSALH DRAMNWHALA REAMRARASH AADLAALNTA AVIPFAALDD VLFPQPLAPE GKAMVARMQA QGVPDLQIAR AVAQSVQKLE ALRDARDAAE LNAMGVTPDH ERWG
|
| |