Gene Jann_3270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3270 
Symbol 
ID3935743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3324666 
End bp3325850 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content66% 
IMG OID637905643 
Producthypothetical protein 
Protein accessionYP_511212 
Protein GI89055761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGGC GCACCATTGT CACGATGATG AAGGATGAGG CGCCCTTCCT GCTGCATTGG 
ATCGCGCATC ACCGGTTGAT CGGGTTCGAC CGGATCGTCG TTTTCACCAA CGATTGCAGC
GATGGCACCG ACGCGATGCT GGATCGGTTG GAGAGGATGG GAGAGGTCAC CCATCGCCGC
AACACGGTTC CCGATGGCGG CAAGCCACAA CCGCTTGCAT TGCGCCGCGC AGGGAAACTG
GCGGAGGTTA CGGGAAGCGA CTGGCTGATC GCGCTGGATG TGGACGAATA TGTCCACGTG
AAGGTCGGGG GCGGGCATCT GGATGATCTG CTGGCGACCG CGCCCGAGGC CGACGGCGTC
GCGCTGACCT GGCGGATGAT GGGGTCCAAT GGCCTGACGG GCTGGACCGA CACCCCGGTG
ACGGAGGCCT ATACCCGCGG CGCACCGGAT CTGTTTCGCA AGGGCTGGGG CGTGAAGACG
CTGTTCCAAC CCTTCGATCA GATGAAACTT GGCATCCACC GCCCCACCGT GAAGGGCCGC
GACAAGGCGG CGTTGGCGCA GCGGGCCTGG GTCAACGGCT CAGCCAAGCC GATGACGCGC
GGGTTTATGG AGGGGATGTG GCGCTCGTCC CTCGCAACGC TCGGTTATCG CCACGCGGAA
ATCGCCCACT ACGCCACCCA GTCGCAGGAG GCCTTCCTGC GCCGTGCCGC ACGCGGCAAC
GTTAATGCCA AGCCCGACAA GTACAACGCC ACCTATTATG GGATGTTCGA TCGCAATGAG
ACGGCGCAAA CCGGGCTTCT GACCGCTGCC GAGGCCACCC GTGCGCGGGT GACGGGCTAC
CTCTCCGACC CCGCGCTCAG CGCGCTCCAT GACCGCGCGA TGAACTGGCA CGCCCTGGCG
CGGGAGGCGA TGCGCGCGCG GGCCTCTCAC GCCGCTGACC TGGCCGCCCT GAACACGGCA
GCCGTCATCC CCTTCGCGGC GTTGGATGAC GTCCTCTTCC CGCAACCCCT TGCGCCAGAA
GGCAAAGCCA TGGTCGCCCG GATGCAAGCC CAGGGGGTGC CGGACCTTCA GATCGCCCGC
GCCGTCGCCC AATCTGTGCA GAAGCTGGAG GCCCTCCGTG ATGCCCGGGA TGCGGCCGAG
TTGAACGCCA TGGGTGTCAC GCCGGACCAC GAACGCTGGG GCTAG
 
Protein sequence
MAGRTIVTMM KDEAPFLLHW IAHHRLIGFD RIVVFTNDCS DGTDAMLDRL ERMGEVTHRR 
NTVPDGGKPQ PLALRRAGKL AEVTGSDWLI ALDVDEYVHV KVGGGHLDDL LATAPEADGV
ALTWRMMGSN GLTGWTDTPV TEAYTRGAPD LFRKGWGVKT LFQPFDQMKL GIHRPTVKGR
DKAALAQRAW VNGSAKPMTR GFMEGMWRSS LATLGYRHAE IAHYATQSQE AFLRRAARGN
VNAKPDKYNA TYYGMFDRNE TAQTGLLTAA EATRARVTGY LSDPALSALH DRAMNWHALA
REAMRARASH AADLAALNTA AVIPFAALDD VLFPQPLAPE GKAMVARMQA QGVPDLQIAR
AVAQSVQKLE ALRDARDAAE LNAMGVTPDH ERWG