| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3244 |
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| Symbol | |
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| ID | 3935716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3292869 |
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| End bp | 3294311 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905616 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_511186 |
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| Protein GI | 89055735 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0142288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGC AAAAAACTCT GAATGGTTGC TCTGGATGTA AGGGAGGGTG CAAAGCACCA
TCCGCCGGCG TGTTTCCTAC CAAGGTGCAG GGGATGGATC CGGTCGTACA GCGCTATGCC
TCCCGCACGA CGCCGCGCTA TACCAGCTAT CCGACGGCCC CGCAGTTCCA AGCCGGGTTT
ACTGATGCGA ACTATCGCGA TTGGCTGCGA CAGCTTGATC CGGCTGACCC GATCTCGCTT
TACCTGCACG TGCCGTTTTG CCGTCAGATG TGCTGGTATT GCGGATGCAA CATGAAGTTG
GCGGCGAAAT ATGCCCCCGT TGCCAGCTAT GCCCAGACGC TCCGCAAAGA ATTGGCGCTG
ACCGCCGATG CATTGCCCGG GCGTATGGTG GTTTCGCATC TGCATTGGGG TGGCGGCACG
CCCACGGCGC TCAGCTCCGA TGATCTGGAA GCGGCGATGG ACGCTGTTCG CGCACGGTTC
GACTTTGCGC CAGAAGCAGA GATCGCCATC GAAAGCGACC CGCGGACCCT GACGGCGGAT
ATGGCGGCGC GGATCGGTGC GATGGGGTTC ACGCGCGCCA GTTTCGGCGT GCAGGAGTTT
GACCCGCAGG TGCAAAAAGC GATCAACCGT GTGCAACCGC CCGAGATGGT GGCGGCCAGC
GTGACGCAAT TGCGGGCAGG CGGCGTGCGC GGCATCAATT TTGACCTCAT CTATGGGCTG
CCGTTGCAGA CGGTCGAAAG CCTGGTGGAA ACGGTGAAGC TCTGCGCCGC GATGCGCCCA
GACCGAGTGG CACTTTTCGG TTACGCCCAT GTGCCATGGA TGGCCAAGAA CCAGCGCATG
ATCGCCGATG ACACGCTGCC CGATGCAGCC GCACGCTCCG CCCAGGCCGA GGCAGCGGCT
GACGCTTTGC GCGCCGAGGG CTACGTCGCC ATCGGCCTGG ATCATTTTGC GCGGCCTGAC
GATGACCTCA CCATTGCGGC GCAAACCGGC AAGCTGCGCC GGAACTTCCA AGGATATACG
ACCGATCAGG CCGAGACGAT GATCGGCCTT GGCGCGACGT CCATCGGGCG CACGCCGTCG
GGCTACGTGC AGAATATCAC CGAGACCGGC GCCTGGGCGC GGGCGGTTGA GGCCGGGCAT
CTTCCGGTTG CAAAGGGCCT TCCGTTCAGG GGCGAAGACC GCTTGCGGGC CGAAGTTATC
GAACGTCTCA TGTGCGACGG TTGGGTGGAT GCGGACGCGA TTGGCCGTCG CCACAATGCG
CCGGACGGCT GGTGGAAGGA GGCCACGGAT ACGCTGCGCG AGATGGAAGG TGACGGCTTG
CTGACCCTGT CGAACGGCAA GGTGGTTCTG ACTGCAAGGG GCCGCCCGCT CATGCGCATT
GCTGCCGCCG CGTTTGACGC CTATCTGGAG GGGAGCAAGG CGCGCCATTC CGTGGCCGTC
TAA
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| Protein sequence | MNMQKTLNGC SGCKGGCKAP SAGVFPTKVQ GMDPVVQRYA SRTTPRYTSY PTAPQFQAGF
TDANYRDWLR QLDPADPISL YLHVPFCRQM CWYCGCNMKL AAKYAPVASY AQTLRKELAL
TADALPGRMV VSHLHWGGGT PTALSSDDLE AAMDAVRARF DFAPEAEIAI ESDPRTLTAD
MAARIGAMGF TRASFGVQEF DPQVQKAINR VQPPEMVAAS VTQLRAGGVR GINFDLIYGL
PLQTVESLVE TVKLCAAMRP DRVALFGYAH VPWMAKNQRM IADDTLPDAA ARSAQAEAAA
DALRAEGYVA IGLDHFARPD DDLTIAAQTG KLRRNFQGYT TDQAETMIGL GATSIGRTPS
GYVQNITETG AWARAVEAGH LPVAKGLPFR GEDRLRAEVI ERLMCDGWVD ADAIGRRHNA
PDGWWKEATD TLREMEGDGL LTLSNGKVVL TARGRPLMRI AAAAFDAYLE GSKARHSVAV
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