| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3242 |
|---|
| Symbol | |
|---|
| ID | 3935714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 3290856 |
|---|
| End bp | 3291542 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637905614 |
|---|
| Product | phosphoribosyltransferase |
|---|
| Protein accession | YP_511184 |
|---|
| Protein GI | 89055733 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.178059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.212015 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGC AACCACATTG GTTCTGGCAA GAGCTTGCCG CCCCCGGCAC CCATGGCATA
CAGCCCGGGA CGATCTTTCG CGACTCCTAT CCTGCCACTT TACCCAATGG GCGGCAGCTT
TTGCTTCCGA TCCGGGATCT TCCGGGCGGA TCGGGTCAGG CCGTGGCATC TTTGATCGTG
AACCAGGCCG CATTTGTGGT GGAAGACGCG CTGGCCGATG CCATGGCGGC TCAATGGCAG
GCGAGCGCGC CGGACATCGT GATCGGCGTG CCGACCCTCG GCCTGCCGCT GGCCAACGCG
GTCGCGCGGC GGCTTGGCCA CACAAGAATA GTGCCTTTGG GGACGTCCAG GAAGTTCTGG
TACACTGACG CCTTGTCTGA ACCGATCCGC TCGATCACCT CACCGGACAA GGGCAAGATG
ATCTATCTCG ACCCGCGCAT GGTGCCCGTT CTGGCAGGCC AACGGGTCCT TTTGATTGAT
GACGTCGTCA GCACCGGCGC ATCACTAGCG GCTGTTTTGC GTCTTCTCAG CAAAGCCAAC
ATTGCGCCCG CCGGGATCGC CGTGGCGATG GAGCAGGGCA CACGTTGGCG CGACGTCCTG
CCCCAGCCCG ATCTGGTGCG CGGCGCGATC CGGTCGCCGA TCCTGGACAA GACAGACGCA
GGCTACGTCG TGGCACCCGC ATCCTAG
|
|---|
| Protein sequence | MSMQPHWFWQ ELAAPGTHGI QPGTIFRDSY PATLPNGRQL LLPIRDLPGG SGQAVASLIV
NQAAFVVEDA LADAMAAQWQ ASAPDIVIGV PTLGLPLANA VARRLGHTRI VPLGTSRKFW
YTDALSEPIR SITSPDKGKM IYLDPRMVPV LAGQRVLLID DVVSTGASLA AVLRLLSKAN
IAPAGIAVAM EQGTRWRDVL PQPDLVRGAI RSPILDKTDA GYVVAPAS
|
|---|
| |