| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3228 |
|---|
| Symbol | |
|---|
| ID | 3935700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3275866 |
|---|
| End bp | 3277209 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637905600 |
|---|
| Product | MobA/MobL protein |
|---|
| Protein accession | YP_511170 |
|---|
| Protein GI | 89055719 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
|---|
| TIGRFAM ID | [TIGR02768] Ti-type conjugative transfer relaxase TraA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCT ATCATCTCCA CGTGAAGGTC ATCGGGCGCG CAGCTGGCTC AAGCGCGGTT
GCGTCCGCTG CTTACCGGTC AGCGTCGCGG TTGCGTGACG AGCGGTTGGA TCGTCCGCAC
GACTTTACGG CCAAGCGCGG TGTGGTGCAT TCGGAGGTGA TGTTGCCGGA GGGTGCGCCA
GATCGGTGGT CCGACCGGGA GCGGTTTTGG AACGACGTCG AAGCAATGGA GGTCCGCAAG
GATGCGCAGT TGGCGCGCGA GGTGGAGTTT GCCCTGCCAC GCGAGATGAG TGAGGCAGAG
GGTATCCGGC TGGCCCGCGA CTTCGTGCAG GCCGAGTTTG TCGATTGTGG CATGGTTGCC
GATCTCAATG TGCACTGGGA TCGCGCCGAG GACGGGACAC TCAAGCCGCA TGCCCATGTG
ATGCTGACGA TGCGCGAGGT CGAGGGAGAT GGCTTCGGTC CAAAGGTCCG GGACTGGAAC
CGGACCGGAA TGGTCGAGCG CTGGCGTGAG CGTTGGGCCG GGTTCGCCAA TGCGCGGTTG
GCGGAACTCG ACATCGATGC GCGGATCGAC CATCGGAGCC TAGAGGACCA AGGGATCGCG
TTGGAGCCGC AGACCCAGAT CGGGGCGCCT GCGCAACGGA TCGCGGGCGA AGGTAGTCCA
GCCGATTGCG CCGAGATGCA CCGCGACATT GCCCGGAACA ATGGCGAGAG GATCATCGCC
AATCCCGCGC TCGCCTTGGA GGCCATCACC CATCAGCAAT CGACCTTCAC GAGCCGCGAC
ATGGCGCGGT TTGCGCATCG CCACAGCGAT GGGATGGATC AGTTCAACGC GGTGAGAAGT
GCCATGCGGA ATGCGCCCGA TCTGGTGCCG CTTGGCACGG ACGGACGGGG TGAGGACCGG
TTCACGACAC GGGCCATGAT CGAAGCAGAG CGGCGCCTGC ACTGCGCGGC GCACCGCATG
GCCAAGACGG ACCGTCATAA TGTGCGAGAG GATTACCGGA AGGCGGCGAT GGCCGGCGCC
GAAGAGCGTG GCCTGGTGTT GTCTGGCGCG CAGGCCGACG CGCTGGCCCA TGTGATCGGC
GGCCGCGACC TGGGCCTTGT TATTGGTCCG GCCGGGACCT GGGCCTTGTT ATTGGTCCGG
CCGGGACGGG CAAGAGTGCG ATGTTGGGCG TTGCGCGGGA GGCCTGGGAG GCGGCAGGGT
ATCGGGTCCG AGGTGCGGCA CTGTCAGGGA TCGCGGCGGA GGGTCTCGAG AGCGGATCTG
GCATTGCGTC GCGCACCATC GCCAGCCTGG AGCACAGTTG GGCGCAGGAA CGCGACCGGC
TCATCTCGAG TGATATCCTG GTGA
|
|---|
| Protein sequence | MAIYHLHVKV IGRAAGSSAV ASAAYRSASR LRDERLDRPH DFTAKRGVVH SEVMLPEGAP
DRWSDRERFW NDVEAMEVRK DAQLAREVEF ALPREMSEAE GIRLARDFVQ AEFVDCGMVA
DLNVHWDRAE DGTLKPHAHV MLTMREVEGD GFGPKVRDWN RTGMVERWRE RWAGFANARL
AELDIDARID HRSLEDQGIA LEPQTQIGAP AQRIAGEGSP ADCAEMHRDI ARNNGERIIA
NPALALEAIT HQQSTFTSRD MARFAHRHSD GMDQFNAVRS AMRNAPDLVP LGTDGRGEDR
FTTRAMIEAE RRLHCAAHRM AKTDRHNVRE DYRKAAMAGA EERGLVLSGA QADALAHVIG
GRDLGLVIGP AGTWALLLVR PGRARVRCWA LRGRPGRRQG IGSEVRHCQG SRRRVSRADL
ALRRAPSPAW STVGRRNATG SSRVISW
|
|---|
| |