| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3197 |
|---|
| Symbol | |
|---|
| ID | 3935668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 3237498 |
|---|
| End bp | 3237956 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637905568 |
|---|
| Product | rhodanese-like protein |
|---|
| Protein accession | YP_511139 |
|---|
| Protein GI | 89055688 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.247323 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCA GACGTGTTTT GATCGGCGTG GGTGCGCTGG CGCTGGTCGC AGGCACCTTT
GCTGCCACCG AGGGCCGCAA CCTATTCTAC GCCGCCCTGT CTGAGGGTGT GGAGCGTCAG
ATTGACGTGT CCACGGCCCA TGATCTGGCG CGCGAGGGGG AGATCGTATT GATCGACATT
CGCCGACCCG ATGAATGGGA GGCAACAGGC AGCCCCGCCT CCGGCCACCG CCTCGACATG
CGCCGCGATG ATTTCACCGA CGCCCTGCTG GCACTGACGG GCGGCGATAC CGATGTGCGC
GTGGCGCTGA TCTGCATGCG TGGCGTCCGG TCATCACGGA TGACCAACCG CCTGACCGAG
GCGGGCTTCA CCCAGATCAT TGATGTGCCC GAAGGCATGC TTGGCTCTGG GGCGGGGCCC
GGCTGGATCA GCGAAGGGTT GCCCCTTGAC CGCACGTAG
|
|---|
| Protein sequence | MNRRRVLIGV GALALVAGTF AATEGRNLFY AALSEGVERQ IDVSTAHDLA REGEIVLIDI
RRPDEWEATG SPASGHRLDM RRDDFTDALL ALTGGDTDVR VALICMRGVR SSRMTNRLTE
AGFTQIIDVP EGMLGSGAGP GWISEGLPLD RT
|
|---|
| |