| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3193 |
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| Symbol | |
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| ID | 3935664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3235049 |
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| End bp | 3235780 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637905564 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_511135 |
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| Protein GI | 89055684 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.800778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAAA GGCTGCAAGA CTTCTCGGAA GACATCATTG GCATGACCGG ACCCCGCGCG
GTGTGGGCCG GAATGGCGCA TCTGGCCGAT GATCTGGGGA TGCCGTTTTG CACGCTGACC
ATGGCCCGGC GCGCGCCTGA TCTGCGATCA TCGCAATTCA TCACCAACCT GCCCGCGCCG
TTTCAAGACA CGTATTGCGA AGGGGGGTTC ATTAACGACG ACCCGTTCTT GTCCCTCATC
TGCCGCGACA TGACCGCCGC TGGATTCATG ACGGACCCCG ACGATTTGCC AGAAGCGGAT
CAACGACAGG GTGCCTTTCT GGATCTCACC CGCTCCTTTG GTGTTGGCAC GGCGCTGTGC
ATCCCCGTCC GCACCACCCG ACAATCGGAG TTTGGAGGTT GGGTGATCGG CGGCGACCTG
CGGGCACGCG ATGTCGCGGA TGGGCGAGAG ATCGCGGCCA TGCAATTGCA GCTGGCAGGC
TTGATCGCGT TTGAACGGTT GAGCGTCCTG ACCCGGCAAG CCAACCACGC CCATAGACGG
CTCAGCCCGA GAGAGAGGGA ATGCCTCCAA TGGCTCAGCG CCGGATTGCG GGTCACGCAA
ATTGCGCACC GCCTGGATAT TTCGGAATCC GCCGTTCATC TCTACATCAA GAATGCACGT
CGCAAATTTG GCGCAAGGAC GCGCGAACAG GCCGTCGCCC ATGCGATTGT GAGCGGAGAG
ATTGAACTCT GA
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| Protein sequence | MIQRLQDFSE DIIGMTGPRA VWAGMAHLAD DLGMPFCTLT MARRAPDLRS SQFITNLPAP
FQDTYCEGGF INDDPFLSLI CRDMTAAGFM TDPDDLPEAD QRQGAFLDLT RSFGVGTALC
IPVRTTRQSE FGGWVIGGDL RARDVADGRE IAAMQLQLAG LIAFERLSVL TRQANHAHRR
LSPRERECLQ WLSAGLRVTQ IAHRLDISES AVHLYIKNAR RKFGARTREQ AVAHAIVSGE
IEL
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