| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3163 |
|---|
| Symbol | |
|---|
| ID | 3935634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3203554 |
|---|
| End bp | 3203841 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637905534 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_511105 |
|---|
| Protein GI | 89055654 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5454] Predicted secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.90075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGTTG TCACCGGCAT CGTGCTCTAC GCCGTCATTT GGTTCATGAC GCTTCTGATC
GCGCTTCAGG TGCGGGTCAC GAGCCAGGAC GAGGCGGGTG AAAAAGTAGC GGGAACCCAC
GGCTCGGCCC CGGTTGACGC GCAAATGAAG ACGCGCATCA TCTGGACCAG CATCTGCGCT
GCAGGCATCT GGGCGGTCGT CGCCTCCATC ATCATATTCG AGCTGGTGAC GATCGATGAC
ATCGACCTGT TCACACGCTT TGGGATGGGC TCCTCGGCGC CGCGTTGA
|
|---|
| Protein sequence | MGVVTGIVLY AVIWFMTLLI ALQVRVTSQD EAGEKVAGTH GSAPVDAQMK TRIIWTSICA
AGIWAVVASI IIFELVTIDD IDLFTRFGMG SSAPR
|
|---|
| |