Gene Jann_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3139 
Symbol 
ID3935610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3177881 
End bp3178753 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content62% 
IMG OID637905510 
Productfatty acid desaturase 
Protein accessionYP_511081 
Protein GI89055630 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.247414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAC GGTGGCCGAC GCTGGCCCTG ATCATCGGAT GCTACGCGGC CTGGATTGCG 
GTGTTGTTTC TGGCACCCAC TGGTCTGGCG CTGATCCTTC TGATCCCGGT GATTGCGCTC
CAATCCTCCC TCCAACATGA AGTGTTGCAC GGCCACCCTT TCGCCAATCG CGCCCTGTCC
GAGGCGCTGG TCATCGGCTC CCTAAACCTC GCCATTCCCT TCATCCGCTT CCGTGATACG
CATCTGGCGC ATCACAAAGA CGCCAGCCTG ACCGATCCCT ACGATGATCC CGAAAGCAAC
TATCTGGACC CGGTGGCCTG GGCCGCCCTG CCGCGACTGT GCCGGATGGT CCTGGCGGCC
AACAACACGC TTCTGGGCCG GATTCTGATC GGGCCACTGC TGGGTCAGAT TGCCTTCATG
GCGGGGGATG CGCGCCTGAT CCGGGCGGGG GACCGGGGCG TCGCATTCGC CTGGGGCCTG
CATGTCGCCA CCGCCCTGCC CATCATCGCG GTCGTGACCC TGTCCCCGAC GCCGCTTTGG
GTTTATGCGC TGGCCTGCTA CGGCGGTCTC TCGCTGCTGA AAATCCGGAC GTTTCTGGAG
CATCAGGCCC ACCTCCGCGC CCGGGGGCGC ACGGTGATTG TGGAGGATCG GGGACCTTTG
GCCTTCCTCT TTCTCAACAA CAATTTTCAC GTCGTCCACC ACATGCATCC CCTTGTGCCG
TGGTATCGGT TGCCGCGCCT TTATGCGGCA AACAAGGACA AATACCTGCG CTGCAATGAC
GGATATCGCT ATGCCAGCTA CGGCCAGATC TTCCGCCAGC ACCTTTTGCG CGCGAAAGAT
CCCGTGGCGC ATCCGCTGTT CGATCACAAA TAG
 
Protein sequence
MQTRWPTLAL IIGCYAAWIA VLFLAPTGLA LILLIPVIAL QSSLQHEVLH GHPFANRALS 
EALVIGSLNL AIPFIRFRDT HLAHHKDASL TDPYDDPESN YLDPVAWAAL PRLCRMVLAA
NNTLLGRILI GPLLGQIAFM AGDARLIRAG DRGVAFAWGL HVATALPIIA VVTLSPTPLW
VYALACYGGL SLLKIRTFLE HQAHLRARGR TVIVEDRGPL AFLFLNNNFH VVHHMHPLVP
WYRLPRLYAA NKDKYLRCND GYRYASYGQI FRQHLLRAKD PVAHPLFDHK