| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3121 |
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| Symbol | |
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| ID | 3935592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3162194 |
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| End bp | 3163801 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905492 |
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| Product | ferredoxin-dependent glutamate synthase |
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| Protein accession | YP_511063 |
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| Protein GI | 89055612 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0069] Glutamate synthase domain 2
[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0236823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.274657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGA TCAAAGTTGC TGACCTCAAC ACCCTGAATG ACCGGGAGCC GGCATACGCG
CTCGTGGCCG ATGTCGATCT CGTGGTGGTG CGCTGGGATG ACGAGGTGAG CGTGTTCTAC
GGCCGTTGCC TGCACCGCGG CGCGTTGATG TCGGACGGGC ATGTTCGGGG AAAGAACCTG
ATCTGCGGGG TTCATGACTG GGATTATCGT TTGGAGTCAG GCGTGTCTGA ATACGCCAAT
GAGGAGGTGC TGCCCAAATT TGACTGCATA ATTGTGGGCG ATGACGTTCT GGTGGACGAG
GACGAAATCG CCGCCTGGGG CCACGCGAAC CCCCAGCCGT TCAATCGGGA CGCATATCTG
GGCCTTTATG CGGACACCTC CCATGGGACG GAGGAAGAGC CCTATGTCGG TACGATCCAA
ACCTACGCCA AAGGCGGGTT GAAACACACC GGCCATCACG GGCAGGTCGA CGCGATGGGT
GTCAGCCGCG CGAAACTGCC GGATTGGGAC GATATCCAGA TCCTCACGGC ACAGCTGCAC
AAGGCCCCGA TGTTGGAGGA TGAGACCGTG GGCACCGACG TGGTGATCGG CCCCAACTCG
CAGAAACCGT TGCGACTGGA GATCCCCCTG TTCGTCTCAG ACATGTCTTA TGGTGCGTTG
TCGGAGCCTG CGAAGGTGGC TCTCGCGCAG GGGGCAGAAA TGGCCGGAAC CGGTATTTGT
TCGGGCGAGG GCGGCATGTT GCCAGAGGAG CAGGCTGCAA ATTCTCGCTA CTTCTATGAG
CTGGCCTCGG GTCGGTTCGG CTTCTCGTGG GAGAAACTCG CCCGCGTTCA GGCCTTCCAT
TTCAAGGGCG GGCAGGGGGC CAAGACCGGG ACGGGCGGGC ACCTTCCCGG GCACAAGGTG
ACAGGCAAGA TCGCCGAAGT GCGGGGGCTG GAGGAAGGAC AATCGGCAAT CTCTCCGCCC
CGCTTCCCCG ACTGGACCGA CCCCGCCCAG ATCAAGGACT TTGCCGATGA AGTGCGGGAC
CGGACGGGCG GCATCCCCAT CGGCTACAAG CTGTCTGCGC AGCATATTGA AAAGGACATC
GACGCGGCGC TGGAGGTTGG GGTGGACTAC ATCATCCTTG ATGGTCGCGG CGGTGGCACG
GGCGCTGCAC CGACGCTGTT CCGCGACAAT ATCAGCGTGC CGACGATCCC TGCGCTCGCC
CGTGCGCGGC GGCATCTGGA CAAGACCCAG CCGGATGTGT CCTTGGTGAT CACTGGGGGC
CTGCGCACCG CCCCCGATTT CATCAAGGCG CTGGCGATGG GCGCGGATGC AATTGCGGTT
TCAAATTCGG CTATGCAGGC CATTGGATGT TTGGCGATGC GGGCCTGCCA TACCAACAAT
TGCCCCGTGG GCATCGCGAG CCAAAAACCG CATCTTGTCA ATCGGTTGGT TGTTGAGAAA
TCAGCGCGCC AATTGGCCAA CTTCTTTGAA GCCTCGACCG AGTTGATGCA GGTGATGGCG
CGTGCGTGCG GCCATGATCA CCTGTCGAAA TTCAAATCGG ATGATCTGAC CACATGGAAA
AAAGAGATGT CCGAGATTTC GGGCGTCGCA TTTGGAGGTG TCTCATGA
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| Protein sequence | MPQIKVADLN TLNDREPAYA LVADVDLVVV RWDDEVSVFY GRCLHRGALM SDGHVRGKNL
ICGVHDWDYR LESGVSEYAN EEVLPKFDCI IVGDDVLVDE DEIAAWGHAN PQPFNRDAYL
GLYADTSHGT EEEPYVGTIQ TYAKGGLKHT GHHGQVDAMG VSRAKLPDWD DIQILTAQLH
KAPMLEDETV GTDVVIGPNS QKPLRLEIPL FVSDMSYGAL SEPAKVALAQ GAEMAGTGIC
SGEGGMLPEE QAANSRYFYE LASGRFGFSW EKLARVQAFH FKGGQGAKTG TGGHLPGHKV
TGKIAEVRGL EEGQSAISPP RFPDWTDPAQ IKDFADEVRD RTGGIPIGYK LSAQHIEKDI
DAALEVGVDY IILDGRGGGT GAAPTLFRDN ISVPTIPALA RARRHLDKTQ PDVSLVITGG
LRTAPDFIKA LAMGADAIAV SNSAMQAIGC LAMRACHTNN CPVGIASQKP HLVNRLVVEK
SARQLANFFE ASTELMQVMA RACGHDHLSK FKSDDLTTWK KEMSEISGVA FGGVS
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