| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3118 |
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| Symbol | |
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| ID | 3935589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3156180 |
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| End bp | 3158561 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905489 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_511060 |
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| Protein GI | 89055609 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.986953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.22362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA TGTCAGACCT TTCCTCCGAC GGGATGCGCG CGCGGATTAC GCAGCACCTG
ACCTATACGC TCGGCAAGGA TAAGGCGCAT GCCAGCCTCT ACGATTGGCG CATGGCGGTC
AGTCACACCG TGCGCGACCT GATTGTAGAG CCATGGTTCG CCGCCACCCG CCGCACCTAT
GAGGCGCAGG GAAAGCGGGT CTATTACCTG TCGATGGAAT TTCTGATCGG CCGCATTCTG
GAAGATGCGA TGATCAACCT TGGTCTGCAC GAGAAGATCG AGGAGGTGCT GGCCGAGGAT
GGTGTGTCCC TGGCGGATGT TGTGGAGGAT GAGCCGGACG CTGCCTTGGG CAACGGCGGC
CTTGGGCGTT TGGCGGCGTG CTTCATGGAG TCGTTGTCCA CCATCGGCTG CCCGGCCTTT
GGCTATGGCA TCCGTTATGA GCACGGCCTG TTCCGGCAAC GGTTTGAGGG CGGACGTCAG
GTCGAAACGC CCGAGGATTG GCTGAACCAA CCCCACCCGT GGGAGTTTGA GCGCCCCGAG
GCCGCCTATA CGATCCCCTT CAAGGGCCAC GTTCACGACG GCATCTGGAC GCCAGCGGAG
ACAGTACTGG CCCGCGCCTA CGACACGCCC GTGGTCGGCT GGCAGGGCAA ATGGGCCAAC
ACGCTGCGGC TTTGGGGCGC GCATCCCACG GAGCTGTTTG ACCTCGACCG GTTCAATTCC
GGCGACCACA CCGCCGCCGC CCATCCCGAG GCCTTGGCCC GCACATTGTC CCGCGTCCTC
TACCCAGAGG ATACCACGGA TGGCGGCAAG GAACTGCGCC TGAAGCAGGA GTTCTTCCTC
GTCTCCGCCG CTCTGCAAGA CCTGCTGCGG CGCTTCACAT CCGAGTATGA TGACTTGCAA
TTGCTGCCTG AAAGGGTCGC GATCCAGATG AACGACACCC ATCCCGCACT TGCGGGTCCC
GAGATGATCC GCTTGCTGAC GGTGGATCAT GGGCTGGATT GGGACGCCGC CAAACGCATC
GCCCAGGGCT GCCTGAACTA CACGAACCAC ACGCTTCTGC CCGAGGCGCT GGAGCGGTGG
TCGACCTGGC TGATGGGTCG CATTCTGCCC CATCACATGC AGATTATCGA GCGCATTGAC
GCAGAACACC GCGCGGCCAC CGACTGCCCG CCGCACCTCT CCATCGTTTG GCAGGATCAG
GTGCATATGG GGACGCTGGC CTTCGTCATG GCGTCCCACG TCAACGGTGT TTCGGCCTTG
CACACGGATC TTATGGGCAA AACGGTCTTC GCCGAGTTAG ACGGCGCCTA TCCCGGGCGC
ATCCTCAACC AGACCAACGG CGTCACGCCG CGCCGCTGGA TGCGGCTGGC CAATCCGGGC
CTGAGCTGTC TGATCACCGA CCTGATCGGC GACGGGTGGG AGGATGACCT TGACCGCCTC
TCTGACCTGA CTGCCTTTGA AGACGACGCC GATGTCATCG CGCGCCTCGC GGCCTGCAAA
CGCGCCAACA AGGTGGCCCT GGCCGACTGG GTCAGCGCGC GATTGGGCGT GACCCTCAAC
CCCGACGCGA TGTTCGACGT GCAGATCAAG CGCATCCATG AATACAAACG CCAGCTTTTG
AACGTGTTTG AAACCATCGC CCGCTGGCAC GCCGTCCGGC AGGATCCCGA TGCCGAGTGG
ACGCCGCGCG TGAAGATCTT CGGCGGCAAG GCCGCGCCCG GCTATTGGGT GGCCAAGGAC
ATCATTCGCC TGATCAATGA CGTGGCAGCG GTGGTGAACA ACGATCCGGT CGTAGGGGAC
CGCCTGAAGG TGATCTACCC GGCCAATTAC AACGTCTCCA TGGCCGAGCG GTTGATCCCC
GCCGCTGATC TGTCGGAGCA GATCTCCACC GCTGGCAAAG AAGCGTCGGG CACCGGCAAC
ATGAAATTCA CGATGAACGG CGCGCTGACC ATCGGCACGC TGGATGGGGC CAACGTGGAG
ATCCGGGAGC GTGTGGGACC CGAGAACTTC TTCCTCTTCG GCATGGACGC CGAGGCCGTG
CAGGCGCGGT ATGCCGTGCC CGACCATGGG CGCGAGGCGA TCCTGGCCAG CCCCGAACTG
GCCGACGTCC TGCAATTGAT TTCTGAGGGG CGATTTTCGC CGGAAGACCC GAACCGCTAC
CACGGCCTTG TTGATGCCAC CTGGAACCAC GACCCCTTCC TCGTGGCCTC AGACTTCGAC
GCCTATGTTG CGGCCCAGGC GCGCGTCGAT GCAGCCTACA AGGACGAGGA CCACTGGCAT
CGCGTTGCCC TGCGCAACAT CGCGGGTTCG GGGCATTTTT CGTCCGACCG CACGATCCGA
GGATATATGA AAGACGTCTG GGGCGCGAAA AGTCTGCTCT AG
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| Protein sequence | MNAMSDLSSD GMRARITQHL TYTLGKDKAH ASLYDWRMAV SHTVRDLIVE PWFAATRRTY
EAQGKRVYYL SMEFLIGRIL EDAMINLGLH EKIEEVLAED GVSLADVVED EPDAALGNGG
LGRLAACFME SLSTIGCPAF GYGIRYEHGL FRQRFEGGRQ VETPEDWLNQ PHPWEFERPE
AAYTIPFKGH VHDGIWTPAE TVLARAYDTP VVGWQGKWAN TLRLWGAHPT ELFDLDRFNS
GDHTAAAHPE ALARTLSRVL YPEDTTDGGK ELRLKQEFFL VSAALQDLLR RFTSEYDDLQ
LLPERVAIQM NDTHPALAGP EMIRLLTVDH GLDWDAAKRI AQGCLNYTNH TLLPEALERW
STWLMGRILP HHMQIIERID AEHRAATDCP PHLSIVWQDQ VHMGTLAFVM ASHVNGVSAL
HTDLMGKTVF AELDGAYPGR ILNQTNGVTP RRWMRLANPG LSCLITDLIG DGWEDDLDRL
SDLTAFEDDA DVIARLAACK RANKVALADW VSARLGVTLN PDAMFDVQIK RIHEYKRQLL
NVFETIARWH AVRQDPDAEW TPRVKIFGGK AAPGYWVAKD IIRLINDVAA VVNNDPVVGD
RLKVIYPANY NVSMAERLIP AADLSEQIST AGKEASGTGN MKFTMNGALT IGTLDGANVE
IRERVGPENF FLFGMDAEAV QARYAVPDHG REAILASPEL ADVLQLISEG RFSPEDPNRY
HGLVDATWNH DPFLVASDFD AYVAAQARVD AAYKDEDHWH RVALRNIAGS GHFSSDRTIR
GYMKDVWGAK SLL
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