| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3107 |
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| Symbol | |
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| ID | 3935578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3141639 |
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| End bp | 3142313 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905478 |
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| Product | ABC transporter related |
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| Protein accession | YP_511049 |
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| Protein GI | 89055598 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000083288 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.565906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCGAGT TGCGTGATAT TTCCTTCTCC TACCCAAACG GAGATTTCCG TCTGTCCGTG
CCAAGCCTTG ATCTGGACGA CGGCGAACGG GTCGCTGTTG TCGGGCCAAG TGGGACCGGC
AAGACCACGC TCTTGAACCT GATCGCTGGC ATTACGGTGC CCCAGGGTGG GCAAATCTCC
ATTGATGGCG ACGCCATGAC CGGACTGTCC GACGCCGCGC GCCGCACGTT TCGGGCCCGC
AAGATCGGTT TCGTGTTCCA GGATTTCGCC CTGCTCGACT ATCTCAGCGC GCGGGAAAAC
ATACTCTACC CGTTCCGCAT CACCTCCGGC ACGCCGCTGG ATGCCGAGGC GCGCGCGCGG
GCAGACCAAC TGGCCGAGGC TTGCGGGCTG AAAGGCAAAC TGTCTCGCCG TCCGGGCGCG
CTCAGCCAAG GTGAACAGCA ACGCGTGGCG CTGTGCCGGG CATTGGTGCG TCAGCCCAAA
CTGATCCTTG CGGACGAGGC GACCGGCAAT CTCGACCCCG AGAACAAATC TGCCATCCTC
GACCTTTTGT TTTCCCGGAC ACGGGAGGCG GGCGCGACGT TGCTCGCCGT GACCCATGAT
CACGATCTCC TGCCGCGCTT TGATCGCGTC ATCGACTTCG CGGACTATCG GATGGCTGCG
GAGGGCGTGG CATGA
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| Protein sequence | MIELRDISFS YPNGDFRLSV PSLDLDDGER VAVVGPSGTG KTTLLNLIAG ITVPQGGQIS
IDGDAMTGLS DAARRTFRAR KIGFVFQDFA LLDYLSAREN ILYPFRITSG TPLDAEARAR
ADQLAEACGL KGKLSRRPGA LSQGEQQRVA LCRALVRQPK LILADEATGN LDPENKSAIL
DLLFSRTREA GATLLAVTHD HDLLPRFDRV IDFADYRMAA EGVA
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