| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3083 |
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| Symbol | |
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| ID | 3935554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3117571 |
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| End bp | 3118131 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905454 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_511025 |
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| Protein GI | 89055574 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.34847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.232987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGTT TCGCGCAAAT CATCGGGACC CTTGCGTCCT TCGGCTTCGG CCTCATCGCA
TTGATGATGG TGGTCGAGGT GGTCGCCCGC TACGGCTTCA ACGCACCAAC GTTCTGGGCC
CATGAAATCG CCGGCCTTCT GGGGGCCGTC GCGTTTTTGT TTGGCGGTGC GTTCTGTATG
GCAGAGCGGG GCCATATGAG AATTTCAGTT GTTGCCGACA GGCTGCCGCG GAAAGCACGG
CTTGGGTTGG AAGGACTGGG CCACCTTTGC GGGATCATAT TTCTGTCGGG CTTGGCCGTC
TCGGGCTGGA GTATCGCGCA ACGCGCGGCC TTTCGCTTCA TGCCCAATGG CACCTGGTTT
CCTGAACGCT CCGGCACATC GTGGAACACG CCACTTCCGG CCTTCATAAA GGTCGCCCTG
TTCCTGGCGG CGGCCCTGTT TCTGATCCTC GTGACCATCC GGCTCTGGCG ACTTCTCACC
CATGGCGAGG AAAGCTACCC ACCGGAGCCC ATTCCGCATG GAGCCATCCC ACCCGATGCG
GGTGAAGGGC CACGGGCCTG A
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| Protein sequence | MTRFAQIIGT LASFGFGLIA LMMVVEVVAR YGFNAPTFWA HEIAGLLGAV AFLFGGAFCM
AERGHMRISV VADRLPRKAR LGLEGLGHLC GIIFLSGLAV SGWSIAQRAA FRFMPNGTWF
PERSGTSWNT PLPAFIKVAL FLAAALFLIL VTIRLWRLLT HGEESYPPEP IPHGAIPPDA
GEGPRA
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