| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3080 |
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| Symbol | |
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| ID | 3935551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3113809 |
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| End bp | 3114213 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637905451 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_511022 |
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| Protein GI | 89055571 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0669156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0908777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACAC GGCGCGTCAT CGTCCCCGCA GGGATGGAAA ACATCTATGA CACCTACCAT
TATGCCCCCG GGATATTGGT GGGCGACACG CTTTATTGTT CCGGTCAGGT GGGGCGCGAC
GCGGATCTGA ACGTGGTGGA CGGGCCCGAA GCGCAGTTCA CCCAGGCCTT CGAGAACGCT
GGCAAGGTTC TGGCAGCCGC GGGGGCCAGC TTCGATGACG TGGTCGAGTT GGAAAGCTGG
TTCGCGGGAT CCATGGATGA GTTGAAGACG TTCATGGCCG TCAAAGACCG CTTCTTTAAA
CATCGCTACC CGACCTGGAC AGGATTTTCC GTAAACGGAT TCTCGATGCC CGGCATCCTT
GTCGAAATCA AATGCAAAGC CATCCTTGGA CTGGAAGACG CATGA
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| Protein sequence | MPTRRVIVPA GMENIYDTYH YAPGILVGDT LYCSGQVGRD ADLNVVDGPE AQFTQAFENA
GKVLAAAGAS FDDVVELESW FAGSMDELKT FMAVKDRFFK HRYPTWTGFS VNGFSMPGIL
VEIKCKAILG LEDA
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