| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3058 |
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| Symbol | |
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| ID | 3935529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3089825 |
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| End bp | 3091333 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905429 |
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| Product | ABC transporter related |
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| Protein accession | YP_511000 |
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| Protein GI | 89055549 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00083367 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.295827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCAC CGACCCTTGA ATACCGCAAT ATGTCGAAAT CGTTTTTCGG GGTGCCGGCT
GTCCGGGGCG TCGATCTGAC GCTTGCACCC GGCACGATCC TTGCGCTCAT CGGTGAGAAT
GGCGCTGGGA AATCCACGAT GATGAACATG CTTGGCGGCG TGTTGGAGCC CGATGCAGGC
ACCATGACCC TCGACGGGCA GCCCTATGCC CCAGCAAAGC CCGCCGATGC GACGGCCGCC
GGGATTGCGT TTATCCACCA GGAGTTGAAC CTGTTCGAGA ACCTCTCCAT CGCGGAAAAT
GTGTTCATCG ACCGAATGCC CCGCACCGGT CCCTTTGTCC GGCGCCGCGC GATGGAGCGG
GAGGCGGCCA AGATGCTGGC GCGCGTTGGG CTGGACGTGT CCTCCGACAC CAAGGTCGAA
CGTCTCGCGC CCGGTGAGCG GCAACTCGTG GAGATCGCCA AGGCGCTGGC CTCGGGCGCC
CGCATCATCA TCCTGGATGA GCCGACGACA TCCCTGACCA ACCGCGAGAC CGAGCGGCTG
TTCGCGGTGC TGCGCGAATT ACGGAGCGAA GGCTGCTCAA TGATCTACAT TTCCCACGTT
CTCCAGCATG TCCTTGATCT TGCCGATGAC GTGGTGGTTC TGCGCGATGG CACCCATGTC
GGCGGTGGCC CGATTGCCGA CTTCGATGTG CCACGTATGA TTTCCATGAT GGTCGGGCGA
GAGATCGACC AGCTTTTTCC GCAGCGGACA GTTCCGGCGG GCGAGGATGT GGTGCTGTCT
CTGGAGGGTG TCAGCCAGCC CGGCATTTGC CGCGATGTCT CCCTCCAGGT CCACAAGGGA
GAGGTGCTTG GCATCTTTGG TCTGATGGGG GCGGGGCGGA CCGAGCTGGC GCGCATTGTC
TTCGGCCTTG ATCCCCATGT TGACGGCACC GTGACCCTGA ACGGCGACCA GCTTTCGGGC
GGCCCACGAG AGCGGATCGC CAGCGGCATG GCCTTCGTGA CCGAAGATCG TCGCGCCGAA
GGTCTGCTGA TGGACAGTGA CATCCGGGAG AACATGGGCC TTGTCGCACT GCCACGCTTC
AAGGGCGGGG GCGGGTTTCT GAGCCAACAG CGTCTTTTGG AGAGTGCCCG GGAGATCGGC
GCCAAGCTGC GGCTGAAAGC GGCGGATGAA AGCCTGTCCC AGCCGTGCCG AAGCCTGTCC
GGCGGCAATC AGCAGAAGGT CGTCATCGGC AAATGGCTCG TCGACCGGCC CGCGCTCCTA
ATCATGGATG AGCCGACCCG GGGCATCGAT GTGGGCGCGA AATACGAGGT TTTCACGATC
ATGAACGAAC TGGCAGCCGA GGGAACCGGC ATCCTCTACG TTTCATCCGA GCTGGAAGAA
CTGATGGGCG TCGCCGACCG CATCCTGGTC ATGCGTGAAG GGGAGGTCGC GGGCCGTTTC
GAAAAGGATG ACTACACGAC GGAAGGCATT CTCGCCTCCG CCTTCGGAAG CAAGGAGGCT
GCCGCATGA
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| Protein sequence | MRAPTLEYRN MSKSFFGVPA VRGVDLTLAP GTILALIGEN GAGKSTMMNM LGGVLEPDAG
TMTLDGQPYA PAKPADATAA GIAFIHQELN LFENLSIAEN VFIDRMPRTG PFVRRRAMER
EAAKMLARVG LDVSSDTKVE RLAPGERQLV EIAKALASGA RIIILDEPTT SLTNRETERL
FAVLRELRSE GCSMIYISHV LQHVLDLADD VVVLRDGTHV GGGPIADFDV PRMISMMVGR
EIDQLFPQRT VPAGEDVVLS LEGVSQPGIC RDVSLQVHKG EVLGIFGLMG AGRTELARIV
FGLDPHVDGT VTLNGDQLSG GPRERIASGM AFVTEDRRAE GLLMDSDIRE NMGLVALPRF
KGGGGFLSQQ RLLESAREIG AKLRLKAADE SLSQPCRSLS GGNQQKVVIG KWLVDRPALL
IMDEPTRGID VGAKYEVFTI MNELAAEGTG ILYVSSELEE LMGVADRILV MREGEVAGRF
EKDDYTTEGI LASAFGSKEA AA
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