| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3009 |
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| Symbol | |
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| ID | 3935480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3028901 |
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| End bp | 3029140 |
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| Gene Length | 240 bp |
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| Protein Length | 79 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905380 |
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| Product | AbrB family transcriptional regulator |
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| Protein accession | YP_510951 |
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| Protein GI | 89055500 |
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| COG category | [K] Transcription |
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| COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
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| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACACT CCAGAATCAC CTCGAAAGGG CAAACAACCG TGCCCAAGGA AGTGCGCCAG
GCGCTTGGCT TGAAGCCCGG CGATCTGGTG CATTACATCG TGCTGCCCTC GGGCGATGTG
CGGATGATCG CCAAACGACC CGCCAAAGAC CTGAGCGGGT TCCTGCATGA CCCCAAGCGG
CCCGCCGTGG CCCTGGATGC GATTGAGGCG GCAATCGCGG CCGGGCCGGT CGTCGAGTGA
|
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| Protein sequence | MKHSRITSKG QTTVPKEVRQ ALGLKPGDLV HYIVLPSGDV RMIAKRPAKD LSGFLHDPKR
PAVALDAIEA AIAAGPVVE
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