Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2996 |
Symbol | |
ID | 3935466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3016369 |
End bp | 3016950 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637905366 |
Product | TetR family transcriptional regulator |
Protein accession | YP_510938 |
Protein GI | 89055487 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.542374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.411304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACGCA CCCAAGGCTC TCATGCCGGT ACGACCGGCC CGAAGGTCCG CGCGACGGCG TTGCGGCTGT TTGCTCAGCA TGGCTATGCG GCGGTCTCCA TGCGCCAGAT CGCGCGGGAG GTGGGCGTTC AGGCCGGGGC GCTGTATCTA TACACCCCTG ACAAACAAGC ACTTTTGTTT GAGCTGATGC GAACCCACAT GGAGGAGCTT CTGGGCGATT GGTCGCCTCC CGGCGGCGGC CCTCTGGCAG AATTGGAAGA TTTCGCCCGT CACCATATCC GCTTTCATCT CGACCGCCCG GACCTTGTCT TCATCGCCTA TATGGAGCTG CGCAATCTGA CGCCCGAGAA TTTCGCGGTC ATCGAAGAGC TGCGCGGCGC GTATGAGGCG CGGTTGGAAA GTGTGTTGCG CAGCGGCGTG GCGGCAGGCG TGTTTGATGT GGCGGATTTG CGGCTGGCGA CCATGGGTCT GATCTCCATG TTGACCGGCG TCACGACATG GTTCCGCGAC GACGGGCGCC TGACCCGCAC GGATGTGGAG GCGATTTACT GGGACATGGT GCGCCGCGCA GTGGCGGCTT AG
|
Protein sequence | MARTQGSHAG TTGPKVRATA LRLFAQHGYA AVSMRQIARE VGVQAGALYL YTPDKQALLF ELMRTHMEEL LGDWSPPGGG PLAELEDFAR HHIRFHLDRP DLVFIAYMEL RNLTPENFAV IEELRGAYEA RLESVLRSGV AAGVFDVADL RLATMGLISM LTGVTTWFRD DGRLTRTDVE AIYWDMVRRA VAA
|
| |