| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2913 |
|---|
| Symbol | |
|---|
| ID | 3935381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2933111 |
|---|
| End bp | 2935000 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637905282 |
|---|
| Product | AMP-binding domain protein |
|---|
| Protein accession | YP_510855 |
|---|
| Protein GI | 89055404 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.235786 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGTT TTGCATCGCT CGAAGACGTC AAGGCCATCG AGGCAGAGAA TCCGTGGCCA
GCCAGCCAAC CCGCCGTTAC GCTCTACGAG TTGCTGACCA ACACCAAAAA CGCCCACGGC
GCTTTGAACG CGATCACATT TCAACTGTTC TCAGGCGCGA CTGACCCGGC GGAGACGCTC
AGCTGGAGCG ACTTTCATGG CCGCGTGACG CAAGCCGCAA ACCTGTTCCG GTCGCTTGGT
GTCGGCCCCA CCGATACGGT CGCCTACCTT CTGCCCAATT GTAACGAGAC GGCCATCACC
CTTTTGGGCG GTGCTGTGGC TGGCATCGCG GCCCCGATCA ATCCGTTGCT GGAGCCTGAG
CAAATCGCCT CCATCTTGCG GGAAACGGGT GCGAAAGTCG TCGTTACTCT CAAACCCTTT
CCAAAGACGG ACGTTGCGCA AAAGGTGAAT GAGGCGCTGG CGATGGCACC CGGTGTCAAG
ACGGTGCTGG AGGTTGATCT GCTGCGCTAC CTTACCGGCC TCAAGAAGTT CATCGTCCCG
TTCCTGCGCC CCAAAAATCC AGCGCAGCAC AATGCCCGCG TTTTGAATTT CACTGCGGAA
TTGAACAAAC AAAACAAGAC CCTGGATTTT GAGGACGTGC GCGAAGATCG CGTGGCGTGC
TACTTTCACA CCGGCGGCAC CACGGGCATG CCCAAGGTCG CGCAGCACAC CTATTCCGGC
ATGATCTACA ACGGTTGGAT CGGCCACACG CTGTTGTTTA CGGAAAAAGA CACTGTCATC
TGCCCCCTGC CGTTGTTTCA CGTCTTCGCC TGCCATGTGA TATTGATGGC CATGGTCGCG
TCGGGCGGTC ACGTCGTCTT CCCCACGCCC CAAGGCTACC GGGGGGAGGG CGTGTTTGAC
AACTTCTGGA AGCTGGTGGA GCGCTGGCAG GTCACGTTCA TCATCACCGT GCCCACGGCG
ATTTCCGCCA TGATGCAGCG TCCGGTGGAT GCGGATATCT CTTCGGTCAA GACGGCCTTC
TCGGGCTCCG CGCCGCTGCC GGTGGAATTG TTTCGCAGAT TCGAGAAGGC GACCGGCGTG
ACCCTGATCG AGGGCTACGG CCTGACGGAA GCCACGTGCC TCGTGTCGTG TAACCCCGTG
GAAGGGGAGA AGAAAATCGG CTCCATCGGC GTGACCTTCC CCCATACGGA TGTGAAAATC
ATTACTGGAA CGCCCAACGG CCCCGTGGAG GCGGAGCGTG ATTCCATCGG TGAGATCTGT
ATCTCCAACC CGGGCGTGTT TTCAGGCCGC ACGTATACGG AAGTCGATAA GAACAAGAAC
CTCTATTACT TCGGTGACTA CCTGCGCACG GGCGATCTGG GCCGTTTTGA CGAGGACGGA
TACCTCTGGA TCACGGGGCG CGCCAAGGAC CTGATCATTC GCGGCGGCCA CAACATTGAC
CCCGCCGAGA TCGAAGAAAC GCTGGCCGGA CATGAGGCTG TGGCCTTCGC GGGTGCCATT
GGCCAGCCCG ATGCCTTTGC GGGCGAATTG CCCTGCGCGT ATGTGGAGCT TGTGGAGGGG
GCAACGATTA CGGAAGCTGA GTTGATGGCC CATTGCTCCA CCCATGTGCA TGAACGAGCC
GCGGTTCCCA AATATCTGGA AATCCTGGAC GAATTGCCAA AAACGGCTGT GGGTAAGGTC
TTCAAGCCGG ATCTGCGCAA AAAGGCGATC ACGCGGATCT ACAACGCAGC TTTGGAGAAG
GAAGGCCATG CCGCCCGCGT GATTGAGGTC CGCGAAGACA AGAAGCGCGG ATTGGTCGCC
TACCTGGACC AGAACGGAGC GGACGCGGAG GGTGTGGGCA AGGTCCTGGG GGAGTTTACG
CGACCTTGGG AGTGGCGGAC GGCCGCTTGA
|
|---|
| Protein sequence | MTRFASLEDV KAIEAENPWP ASQPAVTLYE LLTNTKNAHG ALNAITFQLF SGATDPAETL
SWSDFHGRVT QAANLFRSLG VGPTDTVAYL LPNCNETAIT LLGGAVAGIA APINPLLEPE
QIASILRETG AKVVVTLKPF PKTDVAQKVN EALAMAPGVK TVLEVDLLRY LTGLKKFIVP
FLRPKNPAQH NARVLNFTAE LNKQNKTLDF EDVREDRVAC YFHTGGTTGM PKVAQHTYSG
MIYNGWIGHT LLFTEKDTVI CPLPLFHVFA CHVILMAMVA SGGHVVFPTP QGYRGEGVFD
NFWKLVERWQ VTFIITVPTA ISAMMQRPVD ADISSVKTAF SGSAPLPVEL FRRFEKATGV
TLIEGYGLTE ATCLVSCNPV EGEKKIGSIG VTFPHTDVKI ITGTPNGPVE AERDSIGEIC
ISNPGVFSGR TYTEVDKNKN LYYFGDYLRT GDLGRFDEDG YLWITGRAKD LIIRGGHNID
PAEIEETLAG HEAVAFAGAI GQPDAFAGEL PCAYVELVEG ATITEAELMA HCSTHVHERA
AVPKYLEILD ELPKTAVGKV FKPDLRKKAI TRIYNAALEK EGHAARVIEV REDKKRGLVA
YLDQNGADAE GVGKVLGEFT RPWEWRTAA
|
|---|
| |