Gene Jann_2898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2898 
Symbol 
ID3935366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2915652 
End bp2918129 
Gene Length2478 bp 
Protein Length825 aa 
Translation table11 
GC content64% 
IMG OID637905267 
Producthypothetical protein 
Protein accessionYP_510840 
Protein GI89055389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.523858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGGG CGGAAAGGAA CGCCCCCGGC GCGGGAAAGC AGGCCGGGGG CGAAGGAGAG 
GACAGGACCC GTCATCAAAA CCCTGATGCC AAGAGTATAG CTGGGAACGC CTCACCGACC
GACCAGAAAG TTTTGCTGCC GGACCCTGAT GCATCGGTAG CCTTCCTTGA AGGCTGGCGC
TCCGGTGGTC CTTGGGTCCT GACAGCAATT GAAGTGGACC CTCCCAAGGG TCGCGATCCT
CGAACGCCCA CGGTCGCGCT GTCCGCCCCC GAGAAGGCAC GGCAGTGGAT CACGGATCAC
AGCGGCGGCG GGTGGAACCT TTACTTCACG GTCAACGTGA CGCGCGGCCC TGTGGGAAAG
AAGCCAAAGA AGGCGGACAT GGCGGCTGCG ACGGGTCTCC ACGTGGACGT GGACCCGAGG
CCAGGTGAGG ATATCGACCG CGAGCGCGCC CGGGCGGAGA AGGTCCTGCG GGGATACGGC
CCCCAGCCCA CGGTAATCAT CGACAGCGGC GGCGGCTTTC AGGGCTTCTG GAAGTTTGAT
GAGGAGCTGC ACCTGACGGG CGAGCCCGAG GACGAGACCC GCCACCTGCC CGTGGAGGAG
CGGAACCTCA AGATCGAAGC CGTATTGCAG GGCGACAGCT GCCACAACGT AGATCGCGTT
ATGCGCCTAC CCGGGACCGT TAACTGGCCC AACGACAAGA AGCGCAAGAA GGGGCGCAAG
CCTGCGCTGG CGCAGGTGGT AGATGTTGAC TGGTCGCGGA CCTACGCGCC GGGCGACTTT
GAGCGGAGCC CGATGTTTGC CAAGAGCGCG TCCAGCGGCA CGGCGCAGGT AACCCTGCCC
AAAGACTTGC CGGAGTTGCT GGGGCTTGAA AGCCTGCCCA CTGCCGTAAG CGACCGGACC
AAGATGCTGA TAACGGTTGG CGACGACCCG GACGATCCGA TGCGCTACGC CTCGCGCTCT
GAGGTCCTGT TCGCCGTGTT GTGTGAGCTT GTTCGGGCGG AGGTAGCCGA CGACGTGATT
GCGGCGGTGA TCCTTGACGA GGACTACGGC ATTAGCGGTC ACATCAACGA CCAGGCCGAC
CCACGCCGCT ATGCCCGGAG GCAGATCCAG CGGGCGCGTG ACGAGGCCGT TGACCCCGCG
CTGCGTGAGC TGAATGACCA GTTCACGGTT CTTGAAAACG AGGGCGGCAA GTGCCGCATC
CTTGAGTTTG TCGAGATGCC GACCGGCGTG AAGGGCAAGA CCCGCTCCGT GGTGACGCTT
CAGAGCTTCG AGGACTTCCG CAACCGCTTC CTGAACCGCA GCGTGGTGGT CGGGAAGGAC
AAGGAGGGCA ACGACGTCAA GATGGCCCTC GGCAAGTGGT GGCTACAGAA TGCGGCCCGG
CGGCAGTTCC ACTCTCTGAC GTTCCGGCCC CGTGACGGCG AGGAGGTCGG CACCGGCGCA
ACCCGGCAGT TGAACCTCTG GCAGGGCTTC ACCGTCCGGC CCACGCCGGG CGACTGGTCC
CTGATGCGCG CCCACATCCG CGATGTGCTG GCCAGCGGTG ACGAGGCGTC CGACAGCTAC
ATCATCCGGT GGATGGCGTG GACGCTACAG AACCCTGATG AACCGGCGGA GGTGGCACTT
ACTTTCCGGG GCGAGCCCGG GACCGGGAAG GGCGTGTTCG GCAGGACCAT GGCGCAGCTC
TTTGGGCAGC ACGGCCTGCA CACCGGCGGC AGTGAGATGA TCACGGGCCG CTTCAACAAG
CACTTCCGTG ACTGCTGCCT ACTGTTCGCT GATGAGGTGG TGTGGGACGG GGACCGGAAG
GCAGAGGCCA AGGTCAAGAC CTTCCTGACC GAACCAACGC TGATGATTGA GGGCAAGGGC
GTGGATGCGG TGACTTGGCC GAACATGCTG CACGTCATAA TCTCAAGCAA CAGCGAGTGG
GTTGTTCCGG CTGGCCCATT CGAGCGCCGC TATGCCGTGT TCGATGTGGC GGCGACCCAG
CGCCAGAAGC GCGGATACTT TGCGCCGCTC TTTGCCGAGC TTGAGTCCGG TGGGCTTGCG
GCGATGCTTT GCGACCTGCT GGCGATGGAC CTCGGGCGAT GGCACCCACG CGAAGATGTA
CCCAAGACTG ACGCGCTGAA CGACCAGAAG TCACGCGGCC TTGATCCCGT CCATGCGGCA
GTGCTCGACA TGCTGCGAGA GGGAGCGCTG CCTTCCGACA TATCGGCTGA CGCGCGCGGA
ACCGACGCTC GGCCCTTTGT TGCCACCGAT GAATTGGCGG CATTCGTCCA GCGCCAGAGC
AGGGCTGTGG TCACGTCTGT CGTTGTGTCG AAGCTGCTGG ACAAGATCGG CGGGGAGAAG
AACCGCAAGC GCCGCCCATC TGGCTACGTC CTGCCGCTCT TGGCAGAGGC TCGGGCGGCT
TGGGACGCGC AGCCGGACCT TCCCACCCAG ATTTGGGATG ATGCCGCTGA CTGGGCGGGG
GGAGGTGAGC CGTGGTGA
 
Protein sequence
MKGAERNAPG AGKQAGGEGE DRTRHQNPDA KSIAGNASPT DQKVLLPDPD ASVAFLEGWR 
SGGPWVLTAI EVDPPKGRDP RTPTVALSAP EKARQWITDH SGGGWNLYFT VNVTRGPVGK
KPKKADMAAA TGLHVDVDPR PGEDIDRERA RAEKVLRGYG PQPTVIIDSG GGFQGFWKFD
EELHLTGEPE DETRHLPVEE RNLKIEAVLQ GDSCHNVDRV MRLPGTVNWP NDKKRKKGRK
PALAQVVDVD WSRTYAPGDF ERSPMFAKSA SSGTAQVTLP KDLPELLGLE SLPTAVSDRT
KMLITVGDDP DDPMRYASRS EVLFAVLCEL VRAEVADDVI AAVILDEDYG ISGHINDQAD
PRRYARRQIQ RARDEAVDPA LRELNDQFTV LENEGGKCRI LEFVEMPTGV KGKTRSVVTL
QSFEDFRNRF LNRSVVVGKD KEGNDVKMAL GKWWLQNAAR RQFHSLTFRP RDGEEVGTGA
TRQLNLWQGF TVRPTPGDWS LMRAHIRDVL ASGDEASDSY IIRWMAWTLQ NPDEPAEVAL
TFRGEPGTGK GVFGRTMAQL FGQHGLHTGG SEMITGRFNK HFRDCCLLFA DEVVWDGDRK
AEAKVKTFLT EPTLMIEGKG VDAVTWPNML HVIISSNSEW VVPAGPFERR YAVFDVAATQ
RQKRGYFAPL FAELESGGLA AMLCDLLAMD LGRWHPREDV PKTDALNDQK SRGLDPVHAA
VLDMLREGAL PSDISADARG TDARPFVATD ELAAFVQRQS RAVVTSVVVS KLLDKIGGEK
NRKRRPSGYV LPLLAEARAA WDAQPDLPTQ IWDDAADWAG GGEPW