Gene Jann_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2838 
Symbol 
ID3935304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2855769 
End bp2856155 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content56% 
IMG OID637905205 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_510780 
Protein GI89055329 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.689717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.196154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAA AGGATAAACT ACGCGTGTTG GTGGTTGACG ACATGTCGAC CAGCCGGGGA 
TTGATCGTCC AGGCGTTGGA GTGGATGGGG ATCGGCGCGA TTGATCACTG TGCGGATGGA
ACGACCGCCT TGCAGAAAAT GGCGTCGTCC CCGGTGCATA TGGTGATCTC GGACTACAAC
ATGCCCGGCA TGGATGGCCT GCAGTTGCTG CACTCGTTGA GAAGCAATCA GCAGACCGCG
CGGACCGGGT TTATCCTGAT CACGGGAACC ACCGACAACG GGGTCATCGA CAAGGGAAAA
CAGTTGGGGA TGAACAATTT TCTGAAAAAA CCCTTTTCAC CAACGGCCCT GAAGGCTTGC
ATCGAACGCG TCGTTGGGCC CCTGTAG
 
Protein sequence
MSTKDKLRVL VVDDMSTSRG LIVQALEWMG IGAIDHCADG TTALQKMASS PVHMVISDYN 
MPGMDGLQLL HSLRSNQQTA RTGFILITGT TDNGVIDKGK QLGMNNFLKK PFSPTALKAC
IERVVGPL