Gene Jann_2821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2821 
Symbol 
ID3935287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2835736 
End bp2836185 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content64% 
IMG OID637905188 
Producthypothetical protein 
Protein accessionYP_510763 
Protein GI89055312 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.253372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0804711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACC AAACTCTGTT TACCTCCATC CTTGTTGCCA TCGACGGATC GGATGCCTCC 
CAAAAGGCGC TCGACACGGC CTGTGCGCTG GCCACGACCT TCGGGGCGGA ACTTCACCTC
ATCCACTCCC CCCAGGTGGA GACGATGTCG ATTGCGGTGG GCTATTCCGT CGTCGATGTG
CCCGTGACGC CGGAGCAAGT CTCCGAAGCG GGCAAGGCGG TCTCTGCCGC TGCCGTGGCC
CGGGCCACCG CACTTGGCGT CGTGCCGCAG GAGACGACCG TGGCAGGCGG TGTGCCCGCC
GATGACATTC TGCAATCGGC CAAGCTGAAT GACGTCGATC TGATCGTCAT GGGCCGCCGG
GGTCTGGGCT CAGTGGCCAG CCTGTTTCTG GGCTCGGTCA GCCAGACCGT GAGCAAAAGC
GCCGAATGCT CGGTGCTGAC CGTGCACTAG
 
Protein sequence
MTDQTLFTSI LVAIDGSDAS QKALDTACAL ATTFGAELHL IHSPQVETMS IAVGYSVVDV 
PVTPEQVSEA GKAVSAAAVA RATALGVVPQ ETTVAGGVPA DDILQSAKLN DVDLIVMGRR
GLGSVASLFL GSVSQTVSKS AECSVLTVH