Gene Jann_2728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2728 
Symbol 
ID3935192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2738985 
End bp2739923 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content63% 
IMG OID637905093 
Productdihydroneopterin aldolase, putative 
Protein accessionYP_510670 
Protein GI89055219 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1539] Dihydroneopterin aldolase 
TIGRFAM ID[TIGR00525] dihydroneopterin aldolase
[TIGR00526] FolB domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG AAATACATCA AGCCTTCAGC CATCCAACGG AGCGCGCGAA AGCCACGTCC 
CAAGGGGCGC CGCGCGATCG CATCTCCATG ACGGATCATG TTCGAGACGT CGAAATCGGC
GCGTTTCAGG CCGAACGCGG CATCACCCAG AAAATCCAGT TCGATGTCGT GGTGGAGGTC
GAAACCCGTG CGGAAAGCGC GACAGATGAC GTGGATCGTA TCCTCAGCTA CGACACCATT
TCCGAGGCGA TTGACGTGGC CTTGGCCGCT GAACGGGTCA ATCTTCTGGA AACGCTGGCC
GCGCGGATCG CCGATAGCAT TCTGGAGCAT CCGCTGGCGG CCCGTGTTTT TGTGCGCATC
GGCAAGCTGG ACCGGGGGCC TTACACGCTG GGGGTGGAGA TTTTGCGCGC GGCTCCGGAA
GGCCGCCGCC GTCTGCGCCT TCTGGCCGAG GCTGCGCCGC ACCCCATTGT TGTTCATCTC
TCGGACAAAG CCATCCATCG CCCTGATATA CCGGACCTTT TGGACAGGCT GGAGCAGGCG
GAGGCTCCGC TGATCCTCTG TGTTGATGCG CCACGATTGC CAATTCCCCA AGCCGCCCAT
GCCATGCCAC AGCGCCGCAT CGCGCTTCTG GCGATCGAGC AATCGGCCTG GGTCCTTGCG
GCGCGGGATC CGCGCTGTGT GGTGGTCGAC AGCCGGACCG AGCTGGACTG GGCGATGCGG
CAAGGCAAGA TCAGCGTTTG GGCGCCGTCC AAGCTGGTAT TGGACGCGGT CGAAGGGCCG
GATGCGGACG TGACCGATCC CGTCGCGCTC ACTTTGTGGC TGGCCGATGC GTTTGAGGCG
CAGCGCGTGA TCACCTTGGG CGGGGCGGCT TTGGACGGCG TGGATGCGTT CGCCGCCGAC
GCGCGGCCTG ACCTGATCTC AGTTAAGGCG CATCAATAG
 
Protein sequence
MTDEIHQAFS HPTERAKATS QGAPRDRISM TDHVRDVEIG AFQAERGITQ KIQFDVVVEV 
ETRAESATDD VDRILSYDTI SEAIDVALAA ERVNLLETLA ARIADSILEH PLAARVFVRI
GKLDRGPYTL GVEILRAAPE GRRRLRLLAE AAPHPIVVHL SDKAIHRPDI PDLLDRLEQA
EAPLILCVDA PRLPIPQAAH AMPQRRIALL AIEQSAWVLA ARDPRCVVVD SRTELDWAMR
QGKISVWAPS KLVLDAVEGP DADVTDPVAL TLWLADAFEA QRVITLGGAA LDGVDAFAAD
ARPDLISVKA HQ