| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2614 |
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| Symbol | |
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| ID | 3935077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2631129 |
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| End bp | 2633948 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904978 |
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| Product | membrane protein-like |
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| Protein accession | YP_510556 |
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| Protein GI | 89055105 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5373] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.284738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.14506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAAGTC TGCTGCTTCT TGCTGGTCTG ATCGCTGTCG GCCTTCCCAT TGCGGTGATT
TACCTTTTGG TCGCAATGTC GGGTGCGAAG GCGCGTATTG GCGTTCTGGA GGCGAAGCTG
GCGCATCTGG CGGATGCATC AACCGATGCG CCGGATGCCG AGCGCGCGCA GGACACGTCG
TCGGTTGCGC CATCGTCAAC GCCCGTCCCT CCGACCCAGC CTCCTCCAGC GCAGGCGGCA
CCGTCGCAAG ACCCGGTCAG CAACCGCGCC TGGTCCGGCA CCACATCAGC GAACCCGCTT
TCGCCGGGCG TTCCGGATCC AGAGGCCGTC AAGCCCGGTG CCGAGCCCGA TGAGGCGCAG
CACGTCCCGC GCGCAGTCGT CTTCCGCCAG GATCGGTTTG CCGCAGCGGG GGCCTGGCTT
CGCGACAATT GGTTCCTGGC CGTCGCCGCA ATTTCCCTCG CGCTGGCGGG GATCTTCCTG
GTGCAATACG GCGTGGAGAA CGGCCTTCTG ACCCCGTTCT GGCGGGTTAT GGGGGCTATC
GCTCTGGGGC TGGCACTGGT CACGGCCGGT GAGGTCACGC GCCGCCGGTT TGGCGATGAC
GCGCCTGTCG ATGGGGCCGA AGGGCGCGAC GCGAAGGTTG CGTTCTTGCC GTCCACATTT
GCCGGTGCCG GACTGATCGT GTTGTTTTCC GCGGTGCTGG CCGCCGCCCA TCTCTACGGG
ATGATCGGCG ATGGGGCGAC GTTTGCCTGG TTGATAGTGG TGGCGGCCCT CAGCGTCGTT
TTGGGTTGGT TTTATGGCCC GTTCCTTACG CTTGTGGGGA TCGTGGGCGC ACTTCTCGCG
CCGTTTCTGG TGGGCGGGTC CTCTGACACG CCGCAGCTTT TCTATCTCTA TTTCGGGATC
GTGGCCGTGG TCGCCCTGCT GATCGACGCC GTTCGTCGAT GGGCCTGGGT GTCGGTACTG
GGATTGGTCG GCGCCTTTGC CACCAGCACA TACATCTTCT CGCTCGGGGC AGGGGATGTG
GAGTTTCTTG CCTTTTCAAT CGCGATGGTT TTTGCGGCGG TGATCCTGCC ACCGCTCAAG
CTATCGCCCG GACATAGCGG CTCCATGGTC GCCGAGGCGC TGGCACGAAC GCCTTCCAAC
GGTGTGCAAT GGCCAGAGTT CCCGACCCGC CTGGCGTTCG GCACGATTGC GGCGGCGACC
GGTGCGGCCC TGCTGGTGGC CGCCAATGAT CTGGGCGAGA CCGAAGTCAC GCTGGCCCTT
GGCGCTATTT TCCTGATCTT TGCGCTGGTG ACCCTCTGGT CCCGCAAGGC CGTGGCGCTG
AGCGATGGGG CGCTGTTCGC CCTCCCCGCC ATCGTTGCGG TCGTGGCGTT GCAGGCCACC
GGCAACGGGA CGCTTTTCGC GGCATTTCGG ACCACCGTGG AAGGTGCGCC TGACGCAAGT
CCCGCGATGC AGGCGACGCT GCTGACAGGG CTTGGGGCAG CGTTGAGCTT TCTTGCCCTG
CGCAGGGGTT TGATGGACGA AACATACCCG GGCATCTGGT TGGCCGGATC GGCCATTGCA
GCCCCGCTTG TCGTGTTAGT GCTGGAAAGC CAGTGGCACC CCGCCGATAT CCTCGGTGCC
TACCCTTGGG CACTGCATGC GATGGCCATT GCGGCGGGCC TTGTTATGGC CACCGCCGTC
GTGGCACGGC GGGACCACAC CCATCCGGCG CAAGCCTCCT ACTTCGCACT GGCGGCCACC
GTCATGATCA CCCTGTCGCT GGTTTTGGTG GTGTCGCTGA CCGCCCTGAC CCTTGCCATC
GCGGCGCTTG TGTTGGCGTC CTCCTACGCC GATCGACGGT TCAACCTGCC GTATCTGGGT
GTGTTCGTGA TTGGCGGGGC GCTGGCAATC GGCTGGCGTC TGGTCGTCGA TCCCGGCTTC
ATGACGGCGT TCGAGATGCC GTATTGGGAA ATCGCCCTGG TCTATCTGGG CTCCATTGGA
GCGCTCGCGG CCTCTCACAC CGTCTTGGCG TCGCGCGACC GCTGGCAGCC CCGGATCGTC
GTCAGCAGTG CCGCCTGGCT GGCCGTCTCC GTTTTTGTAT CGGTGCTTCT ATGGAAGTGG
ATGAAGGGAT TTGACATCGA CGTCTCCCGG GCATTTGCGG GCCTGACTGC ACTGGTGTGG
CTCAGCTCGG CCGCCGTTCA GCTGTGGCGT TTGCAGATCG GGGGACACTG GCTCTGGCGG
ATCCGCCTTG GTCTAGCGGG TGTGACGGGC CTGATCGGTC TTGGTTGGCT TGGATGGGCG
GTGGTCGTTC AAAACCCGCT GACGACATCC ATACCCGTCC GTGGGCCGTG GATCTTCGAC
ACGCTTCTGG TGGCCTACGT GCTGCCCGCC ATTCCCTTCG TGCTGATCGC GTGGAGGTAC
ACCCATCTGC CCCGGCTTGC TCGGATGGCC TCGGCCTGGG TGGCGGCGGG CCTCGGCGGG
TTCTATGTGG CGCTGGAGAT CCGGCGCTTC TGGCAGGGTG ACATTCTGTC GGGCGGTGCC
GTCCGCGACG CAGAGCTTTA CAGCTACACA ATTGCGCTTC TGCTGACCTC GGTCATCGTG
CTGTTCATCG CCTTTCTTCG CCGATCTCAC CTGTTGCGAC GGGTGGCGAT TGCGGGGATC
GCGCTGACCA TCGCGAAGGT CTTTCTGATT GATATGAGCG GGTTGACGGG GCTGTTGCGC
GTCGTCTCGT TCCTTGGACT GGGTCTTTCG ATGGCGGGTC TCGCCTGGAT CGTCCGGGTG
ATGAATGATC AATGGGAGAC GCCTGATACC ACCGGGTCTG ACAACCCGAA TGACGGTTAG
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| Protein sequence | MESLLLLAGL IAVGLPIAVI YLLVAMSGAK ARIGVLEAKL AHLADASTDA PDAERAQDTS
SVAPSSTPVP PTQPPPAQAA PSQDPVSNRA WSGTTSANPL SPGVPDPEAV KPGAEPDEAQ
HVPRAVVFRQ DRFAAAGAWL RDNWFLAVAA ISLALAGIFL VQYGVENGLL TPFWRVMGAI
ALGLALVTAG EVTRRRFGDD APVDGAEGRD AKVAFLPSTF AGAGLIVLFS AVLAAAHLYG
MIGDGATFAW LIVVAALSVV LGWFYGPFLT LVGIVGALLA PFLVGGSSDT PQLFYLYFGI
VAVVALLIDA VRRWAWVSVL GLVGAFATST YIFSLGAGDV EFLAFSIAMV FAAVILPPLK
LSPGHSGSMV AEALARTPSN GVQWPEFPTR LAFGTIAAAT GAALLVAAND LGETEVTLAL
GAIFLIFALV TLWSRKAVAL SDGALFALPA IVAVVALQAT GNGTLFAAFR TTVEGAPDAS
PAMQATLLTG LGAALSFLAL RRGLMDETYP GIWLAGSAIA APLVVLVLES QWHPADILGA
YPWALHAMAI AAGLVMATAV VARRDHTHPA QASYFALAAT VMITLSLVLV VSLTALTLAI
AALVLASSYA DRRFNLPYLG VFVIGGALAI GWRLVVDPGF MTAFEMPYWE IALVYLGSIG
ALAASHTVLA SRDRWQPRIV VSSAAWLAVS VFVSVLLWKW MKGFDIDVSR AFAGLTALVW
LSSAAVQLWR LQIGGHWLWR IRLGLAGVTG LIGLGWLGWA VVVQNPLTTS IPVRGPWIFD
TLLVAYVLPA IPFVLIAWRY THLPRLARMA SAWVAAGLGG FYVALEIRRF WQGDILSGGA
VRDAELYSYT IALLLTSVIV LFIAFLRRSH LLRRVAIAGI ALTIAKVFLI DMSGLTGLLR
VVSFLGLGLS MAGLAWIVRV MNDQWETPDT TGSDNPNDG
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