| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2597 |
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| Symbol | |
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| ID | 3935060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2610335 |
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| End bp | 2611327 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904961 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_510539 |
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| Protein GI | 89055088 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.443228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.425979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG CAAGACACAT CCCCGACCGT CTGCGAAGCC CGGCGCTCAA GGCGTTCAAG
TCGTGGGAGA CGCTGCTGCT GGCCGTGGCC ATCGCGATTT TCATCACCAA CTCCTTCCTG
TCGCCCTATT TCCTGAACGC GTGGAACCTG AGCGACGCGA CCTTCAACTT CACCGAAAAG
GCCATGATCG CCTTCGCCAT GGCCCTGCTG ATCGTCGCAG GCGAGATCGA CCTGTCCGTC
GCCTCCATCA TCGCGCTTGC CTCCACCGCG ATGGGCTATG CGCTGCAATT CGATGTGGGT
GTGGTGGGTT TGGTGCTGAT CGGGCTCGGC ACGGGCGTCT TGTGCGGCGC ATTCAACGGC
GCGCTGGTGA CGAGCCTTGG CCTGCCGTCC ATCGTTGTGA CCATCGGCAC GATGAGCCTC
TTTCGCGGCA TCTCCTACAT CGTGCTCGGC GATCAGGGGT TCCGGGGCTA TCCGCCCGAG
TTCAGCTATT TCGGGCAGGG TTACGTCTAC TGGGTAATCT CGTTTGAATT CGTCCTCTTC
GCCATCCTCG CGGTCGTTTA TTACGTGCTC CTGCACCGCA CCAATTTTGG CCGCGCGGTC
TACGCCATTG GCAACAACCC CACCGGCGCA TTGTTCTCGG GCATCCGCGT GGCGCGGGTA
AAGTTTATCC TGTTCCTCCT CACGGGACTG ATGGCTGGCC TCGCGGCAAT CTGCCTGACC
GCCCGCCTCG GCTCCACCCG CCCGACCATC GCCCTGGGGT GGGAGTTGGA GATTGTCACA
ATGGTGGTCC TTGGCGGCGT CAACATCCTG GGCGGGTCCG GCAGCATCCC CGGCGTCGTC
ATCGCGGCCT TCGTCATGGG GCTTGTCACC TTTGGTCTGG GCCTTCTGAA CGTGCCCGGC
ATCGTGATGT CCATTTTCAT CGGCTGCCTA TTGATCGGTG TGATCGCCCT GCCCCGGCTC
TGGTCCCAAT TTCAACACGC CCGGAGGAGA TGA
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| Protein sequence | MSDARHIPDR LRSPALKAFK SWETLLLAVA IAIFITNSFL SPYFLNAWNL SDATFNFTEK
AMIAFAMALL IVAGEIDLSV ASIIALASTA MGYALQFDVG VVGLVLIGLG TGVLCGAFNG
ALVTSLGLPS IVVTIGTMSL FRGISYIVLG DQGFRGYPPE FSYFGQGYVY WVISFEFVLF
AILAVVYYVL LHRTNFGRAV YAIGNNPTGA LFSGIRVARV KFILFLLTGL MAGLAAICLT
ARLGSTRPTI ALGWELEIVT MVVLGGVNIL GGSGSIPGVV IAAFVMGLVT FGLGLLNVPG
IVMSIFIGCL LIGVIALPRL WSQFQHARRR
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