Gene Jann_2574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2574 
Symbol 
ID3935037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2583148 
End bp2584047 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content65% 
IMG OID637904938 
Product2-keto-3-deoxygluconate kinase 
Protein accessionYP_510516 
Protein GI89055065 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.751635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCG TGGTGTCGAT TGGCGAGTGT ATGGTCGAAA TGGCACCCTC TGGCACGCCG 
GGGACCTTCG CGATGTCGTT TGCTGGCGAT ACGTTCAACA TGGCCTGGTA TCTGGCGCGG
CTCGCACCCG GCTGGCAGGT TGAGTTCCTG ACGGCCATCG GCACGGACAG TCTCTCGGAC
GCCTTCCGTA CGTTTGCGGC AGATGCCGGG ATCGGCACGC AGCATATGGC ACGGCATCCG
GACAGGGGAT TGGGCCTCTA CCTCACGCAG CTGGATGATG GGGAGCGCAG CTTCCACTAT
TGGCGCGAGA CGTCCGCCGC CCGCACGCTG GCCAATGATG AAGAGGCGCT GACCGCGTCC
TTGCAGGGCG CCGACATCGT GTTTTTCAGC GGCATAACAC TCGCCATCCT GACGGAGGAG
GCGCGGGAAG TGCTGTTTGA TGCCATCTCC GAGGCGCAGG CAGGTGGCGC AGTCGTGGCC
TTCGATCCCA ACATTCGCGA CGCGCTTTGG GCCGATCCGG AAGATATGCG CGCGGCGATC
ATGGAAGCCG CTCTCAGCTC GGAAATCGTC ATGCCGTCTT TTGAGGATGA AGCCCGCCAC
TTCGGCGATG CAAACCCTGC GGCGACCGTG GCGCGATACC TCTCGGCCGG GGCCACAAGC
GTGGTCGTCA AGAACGGCGC GGGAGATGTC CACTATTCCT GCGGCGGGGA GGCGGGCGTC
GCTACGCCCA CATCCGTGAA CGCGGTCGTC GATACCACGG CGGCGGGCGA CAGCTTCAAT
GCGGCATTTC TGGCCAAGCT GATCGCGGGC ACGCCGCCTG CCGACGCGGT GGCCGCCGCC
TGTGCCGTCG CGGGCAACGT CATCCAGTCT CCCGGCGCGC TGGTGGAGGA TATCGGCTGA
 
Protein sequence
MTRVVSIGEC MVEMAPSGTP GTFAMSFAGD TFNMAWYLAR LAPGWQVEFL TAIGTDSLSD 
AFRTFAADAG IGTQHMARHP DRGLGLYLTQ LDDGERSFHY WRETSAARTL ANDEEALTAS
LQGADIVFFS GITLAILTEE AREVLFDAIS EAQAGGAVVA FDPNIRDALW ADPEDMRAAI
MEAALSSEIV MPSFEDEARH FGDANPAATV ARYLSAGATS VVVKNGAGDV HYSCGGEAGV
ATPTSVNAVV DTTAAGDSFN AAFLAKLIAG TPPADAVAAA CAVAGNVIQS PGALVEDIG