| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2562 |
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| Symbol | |
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| ID | 3935025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2564298 |
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| End bp | 2566391 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637904926 |
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| Product | RND efflux transporter |
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| Protein accession | YP_510504 |
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| Protein GI | 89055053 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.143404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAC AGGCGACCCC TATGACGGAT ACCATTGTGG CACGACGCAT CAGCACAACA
CGCTGGCTGA AGGGGCTGCT TGCGCTTGCG ATCACGCTTT TGGCGCTCTG GGGTGCGCGC
GATCTGCATG TGGAGGCCGA TGTTGTCGGC GCGCTGTCGG GCAACAGCGA AGGTTATCTG
GCCTACGCCG CGTTCCAGGA CCGGTTTCAA CTGGGGGCTG CCGACGAGGC GCTGCTGGTC
CGGGCGGAAG ATCTGGCCGA TCCCGCGGCC TTTGAGGCGC TGGAGAACCT GATCCTCGAT
CTGCAATTCA CCGACGGCGT GGCGGAGGTT GTCAGCCTGT TCTCCCTGCC GGCCGAAGGC
TCGACCACGC CCCTGATCCT CGCCAATGAA GACACCCCCC TCGCGGACAG GTTCGCGGCC
TTCGCGGCAG CCGGTCCCGC CGCCGGTGCG CTGGTCACGG AAGGGCGCGA TGCGGCGCTG
TTGCATGTCA TCGCGGTGAC GGATGCCGCG CCCGGTGATA TCGCAACCGC CCTGCCCCCG
TTGATTGAAG CCGCAGCCCC CCTTTCCGTC GCCCCGGTCG GTCAGGCGGA GGTGGAGCGT
CAGATCTCCA GCAACCTGAT CCTTGATCAG ACGCTGGTGA CACCCGTCGC GGTCCTGATC
TGCATCATCG TCGGCGCGCT GATCCTGCGG TCGATCCGGG CCGTGTTGGT CTGTGCGGCC
CCGGCGATAT GCGGCGTGTT GTGGTTCATG GGCCTGCTGG GATGGGCCGG TGAGGCGTTG
GATCCGTGGC TGTCGACCCT GCCGATGCTG GTGATGGTTC TGGCCTTCGC CGACACGCTG
CACCTGTTTT ATGCCAGTCG AGAGGAAGGT GGCCTCGACA AAGCGGTCCA TAACGTGATG
CCCGCCGCCT TCATGACCTC GCTGACCTCG GCGCTGGCGC TTGCGAGCTT CGGGTTTGCG
GGCAGCGACT CGCTCTGGGG TCTGGCCGTC TGGGGACCTG CGGCGGTCTT CAGCGGGTTT
GCGGCGGTCT ATCTTCTGTT CCCGCTGCTC AGCCGCCTGA TCATCCGCAA GGAAATCAAC
CACCCCGCCG GGTTTTCCTA CGTCATGGGA CCCGCCCAAA GCGGCCTTCG GCACCCGCGC
ACCATGGCCG TGGTGGCCGT GGTCGTGGTG ATCGGCCTGA TCCCCGGGGT GAACAGCACG
GACCCTGATT TCTCCATCTC CGAGCATATT CGCGATGACG CCCCTCTGGG CCGCGATCTG
ACATTCATGG AGGAGGAAGG GCTGGGAAGC GCCAGCCTGT TTGTCGTGAT CGACGACACC
GATGGGGATC CGGGCCTGTC GCCCGCGGAT GGGGATCGGA TCGCCACGGT CGCATCCCTT
GCGATCAGCG GGCCGGGGAC GACATCGGAC GACGCGACAC CGGCAGTGCC GGAGCGGTTC
CGCGCCGAGG ATGGGCTGGC CGTGGCCCTG CCCGTTCTGG TGCCCCTGGG CAATGGCCCG
GAGCGGTTCG AGGCAGAGCT GGACCGGCTG CGCGCAGGCA TTGAGGAGGC CGGCCTGTCC
GATGTGGCGC GGCTGGAGGG GCAATCGCTG CTGGCCCATG AAGTCGTGCC CGAAACGGTG
GATGCGATGC GGTCGTCGTT CTACATCGCC CTCGCCGCGA TTTCGCTGGT GGTGGCTCTG
TCCCAACGCT CCATCGCCCT GGCGCTGTTG GCCACCGCGA TCAGCGCGCT TCCGATGATG
GCCATCGAGG GGGTGCTGTA TCTGTCGGGG CGCGGCATGA CGATGACGGC GGCCATCGCC
CTGACCGTTG CCTTCGGCAT CGCAGTGGAC AACACGATCC ACTATCTCAA CCGCTGGCGA
CGCTCCAACG GGCCGAAGGG CACGCGCCTC GGCGAAGCCC TTGGGCACGC AGGCCCGCCC
ATGGTCGCCT CCACCCTCAT CATGACACTC GGTTTCGGCG CAACCTTGCT GAGCGCGACC
GCCTCCATGC CGCAGTTTGG CGTTTTTGTG ATCTCGGCGT TATGGATGGC CCTGATCGCG
GCCCTATGGT TCCTCCCAGC CCTGATCCGC CTGGTCAGAC GAAAGGAAAT CTGA
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| Protein sequence | MKRQATPMTD TIVARRISTT RWLKGLLALA ITLLALWGAR DLHVEADVVG ALSGNSEGYL
AYAAFQDRFQ LGAADEALLV RAEDLADPAA FEALENLILD LQFTDGVAEV VSLFSLPAEG
STTPLILANE DTPLADRFAA FAAAGPAAGA LVTEGRDAAL LHVIAVTDAA PGDIATALPP
LIEAAAPLSV APVGQAEVER QISSNLILDQ TLVTPVAVLI CIIVGALILR SIRAVLVCAA
PAICGVLWFM GLLGWAGEAL DPWLSTLPML VMVLAFADTL HLFYASREEG GLDKAVHNVM
PAAFMTSLTS ALALASFGFA GSDSLWGLAV WGPAAVFSGF AAVYLLFPLL SRLIIRKEIN
HPAGFSYVMG PAQSGLRHPR TMAVVAVVVV IGLIPGVNST DPDFSISEHI RDDAPLGRDL
TFMEEEGLGS ASLFVVIDDT DGDPGLSPAD GDRIATVASL AISGPGTTSD DATPAVPERF
RAEDGLAVAL PVLVPLGNGP ERFEAELDRL RAGIEEAGLS DVARLEGQSL LAHEVVPETV
DAMRSSFYIA LAAISLVVAL SQRSIALALL ATAISALPMM AIEGVLYLSG RGMTMTAAIA
LTVAFGIAVD NTIHYLNRWR RSNGPKGTRL GEALGHAGPP MVASTLIMTL GFGATLLSAT
ASMPQFGVFV ISALWMALIA ALWFLPALIR LVRRKEI
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