| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2490 |
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| Symbol | |
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| ID | 3934948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2487836 |
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| End bp | 2490337 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904849 |
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| Product | hemolysin-type calcium-binding protein |
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| Protein accession | YP_510432 |
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| Protein GI | 89054981 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0747804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0246403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAC CAATAGACGT TAACGATTTG CGCGGCGGAA CGAACACAGA TGACGCGCAT
GGTGTTACGA TGTCAGCCGA TGGTGGCGAC GACACAGTCC GCGCGGGCGA TGACCTGCTG
GCTGGCACGG GCGATGATGA CCTGCTGCTC GGGGGCTCCG GCAATGACCG CGCCGATGGT
GGCGCGGGCG ACGACACGAT CTTTGGGGAC GCCGGTGGCC GGGGCACGAC CTCCCTGCGC
GATGTGTTTC AATGGGACCT TGCGCCCAAC ACGGGCGCGT CCGATTTCAG TCAGAACACC
GGCAATGTGA TCGTGACATT CTCAGAAGAA AATGGCGGCG CCTCCGACAA TATCTCGACA
GAGATCCAAA ATGTCACCGC TATTGAAACC GGCCCATTGG GTGCCGTCGA TAGCACCTCT
TCTCTGGATA GTGTGACGAA CGGGCCGGGC AATTCCGACA CCTATTCCCT TTCGTTCTCG
GATCCTGTCG AGAATGTCTC TTTCCGCGTC AATGACGTTG ACGGCGATGG TGTCGTGCGC
ATCCAGGCCT TTGACGTGAG CGGCGATCTG ATCGAAGTGC AGCTCGATGG GGGCTCCAAC
GTCACCCTGC TGGACACAGA CAGTGTTGCG GGTGCCGATA GTGCAGACAG CAACGGCGGT
TATGGACCTG ATATTTCAGC AGAATACTCG GTTCTGGTGA CGATCCCGGG CCCCGTGTCT
CAGATCCAGA TCTTCCATGT ACAAGACGGC TCCGGCAATT CCGGCGTCAA CGTCACGGAT
GTCTATTTCG ATGTGCCCAA CGCCGGCCCG CCTGCGGGCG ACGGCGATGA CACGCTGCTT
GGCGGTGAGG GCGATGACCT GATCTACGGC AATGGTGGCG ACGACAGCAT TCAGGGCAAT
TCCGGTGATG ACACCCTGTT TGGCGATGAC CCCGCCGACG GCACCGTCGT GTCCGGCAAT
CTGATCTTCA ACGGCTCGTT CGAGATCACC TCCGGCATGA ACACGCGGGG CTATGGCTTC
GTGGCGATGA ACGGCGATGC CCCGGGCTGG ACCGATGCCA GCGGCGGTCA GATCGACTTC
CACAATGACG GACGCGGCGG CATTGAACCG ACCGATGGCC AGAATTGGCT GGATCTGGAA
GCCTCCCCCG GCAATGGCCG CATCGGTCAG GATGTCGAAG GCATTCAGGT GGGCGAGACC
TATCGCCTGA CCTTTGACGC AGGCGACAAG AGCAATGAGC CGCAATCCGG CGCAGGCGAA
AACCTGATTG AGGTCTATTG GGGCGGCGAG CTGATCGCCC TTGTCGACCC CGAAGCGGGC
CAGATGGACC GATACACCTT TGAGGTGAAG GGCGGCGCGG GGGACGGCTC GGACCGGCTG
GACTTCGTCG GGCGTGGTGA TCTGGACAAT TTCGGTGCGT CCATCGACGA CGTGGTGCTT
GTGCAGCTGG CCAGCCCCCC CGGCGATGGC GGTAACGATA CGATCGCGGG CGGCAGCGGC
GATGATGTGA TCGACGGACA AGGTGGCGAT GACGTGCTGG ACGGCGGCGC GGGTGACGAC
ACGATCACCG GTGGCGCGGG CGACGACCTG ATCGTGGGTG GTCCGGGGGC CGACAGCCTG
GACGGGGGGA CGGGCAACGA CACCTTCGCT GTGGGCACCT CCACCGATCC CGTCTTCGGC
AACGATGAAG GTGAGGGCCT TGGGGACACG ATTGTCGGCG GCGAAGGTCC CGGGAACCCG
GACGCGGAAG AGGACGTGCT GGACCTGACC GGGTCGGTCG ACTTTGACAT CCTTTATGAG
GATTCGATGG ATCCCACTGG CATGCCGGGC GAAAGCGGGC GCGTCGTGTT CTACACCGAC
GACACCAAGA CAACCGCCAA GGGAGAGCTG GTCTTCAAGG AGATCGAGAC CGTCATTCCC
TGCTTCACCC CCGGGGCGAT GATTGCCACA CCGCGCGGCG AAGTTCCGGT GGAAAGTTTG
CGCGAAGGCG ACAAGGTGAT CACCCGCGAC AATGGCATTC AGGAGATCCG CTGGACCGGG
CACCGGACCC TGAACCGCGC GGAGCTGGCC CGCGACGCGC GCCTCAAGCC GATCCGGATC
AGGGCGGGCG CGCTTGGGCC CAATCTGCCG GAACGTGACA TGCTGGTCAG TCCGCAACAT
CGGGTTCTGG TCACCGGCGA GACACCGCAG ATCTATTTTG AGGAAAGTGA GGTTCTTGTC
GCCGCCAAGC ACCTGATCGG ACAGGCCGGT GTCAGCGTCG TGGACACCCT GCGCACCACC
TACATCCACT TCATGTTCGA CTGCCACGAA GTTGTGCTGT CGGACGGAGC CTGGACAGAA
AGTTTCCAGC CCGGGGATCA CACTCTGGGA TCGATGGGCA CGGCGACACG GGACGAGATT
GTCGCGCTGT TCCCGGACCT GGCCACCCAC GGAGGATTGA CGGAATACGC GGCAGCCCGC
CGCTCGCTAA AGGCTCACGA GGCGCAGCTT TTGCAACTCT GA
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| Protein sequence | MTTPIDVNDL RGGTNTDDAH GVTMSADGGD DTVRAGDDLL AGTGDDDLLL GGSGNDRADG
GAGDDTIFGD AGGRGTTSLR DVFQWDLAPN TGASDFSQNT GNVIVTFSEE NGGASDNIST
EIQNVTAIET GPLGAVDSTS SLDSVTNGPG NSDTYSLSFS DPVENVSFRV NDVDGDGVVR
IQAFDVSGDL IEVQLDGGSN VTLLDTDSVA GADSADSNGG YGPDISAEYS VLVTIPGPVS
QIQIFHVQDG SGNSGVNVTD VYFDVPNAGP PAGDGDDTLL GGEGDDLIYG NGGDDSIQGN
SGDDTLFGDD PADGTVVSGN LIFNGSFEIT SGMNTRGYGF VAMNGDAPGW TDASGGQIDF
HNDGRGGIEP TDGQNWLDLE ASPGNGRIGQ DVEGIQVGET YRLTFDAGDK SNEPQSGAGE
NLIEVYWGGE LIALVDPEAG QMDRYTFEVK GGAGDGSDRL DFVGRGDLDN FGASIDDVVL
VQLASPPGDG GNDTIAGGSG DDVIDGQGGD DVLDGGAGDD TITGGAGDDL IVGGPGADSL
DGGTGNDTFA VGTSTDPVFG NDEGEGLGDT IVGGEGPGNP DAEEDVLDLT GSVDFDILYE
DSMDPTGMPG ESGRVVFYTD DTKTTAKGEL VFKEIETVIP CFTPGAMIAT PRGEVPVESL
REGDKVITRD NGIQEIRWTG HRTLNRAELA RDARLKPIRI RAGALGPNLP ERDMLVSPQH
RVLVTGETPQ IYFEESEVLV AAKHLIGQAG VSVVDTLRTT YIHFMFDCHE VVLSDGAWTE
SFQPGDHTLG SMGTATRDEI VALFPDLATH GGLTEYAAAR RSLKAHEAQL LQL
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