Gene Jann_2481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2481 
Symbol 
ID3934939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2477011 
End bp2477310 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content63% 
IMG OID637904840 
Productputative ABC transporter periplasmic sugar-binding protein 
Protein accessionYP_510423 
Protein GI89054972 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0847246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0433381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGGAGC AGGAGTTGAT CGGAGAGGTC ATCGTCGTCG GGCCGTTCAT TCCCAGCCAG 
GGACAGGCGC TGATGAATGC GGGCGTCATC ACGGGTGGCT TTCTGTGGAA CCCGCAGGAT
GCGGGCTATG GGATGGTATC GCTTGGCAAA GTTCTGGCCG AGGGCGGTGA AGTGACGGAC
GGCATGACCC TCCCCGGTCT GGGGCCGGTG GACGTGGTTT GGGACCTCAG GTCGCGGCGT
GCGAACGCGC AGATCGACCT GAACCCCGAT AGCATCGACA TGTGGGCCGA GATCATCTGA
 
Protein sequence
MQEQELIGEV IVVGPFIPSQ GQALMNAGVI TGGFLWNPQD AGYGMVSLGK VLAEGGEVTD 
GMTLPGLGPV DVVWDLRSRR ANAQIDLNPD SIDMWAEII