| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2463 |
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| Symbol | |
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| ID | 3934920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2456799 |
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| End bp | 2458466 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904821 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_510405 |
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| Protein GI | 89054954 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.31086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000559828 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGATT TCACCCACAC GACCACGCAA GTCCAACAGC AGGGCGGGCT CACGACCCAT
CCGGTCGCCG AGATGTATGC CGCCGAGCAT AAGGCCGGTC GCCTTGACCG CCGCGAATTC
CTCGTGCGCT CCACCGCTCT GGGCCTCAGC GCCGCCGCCG CCTATTCGCT GATCGGGGCC
ACGCCCGCCA TGGCCGACGG CCACCGCGCC GTACCCGCCG AGGGCGGCAC CCTGCGCATC
CAGCAGGAAG TCCGCGCCCT CAAGGACCCC CGCACCTTTG ACTGGTCGCA GATGGCCAAC
GTCACCCGCG GGTTCCTGGA ATATCTGATC CAGTACAACA ACGACGGCTC GTTCGAGGGC
ATCCTACTGG AAAGCTGGGA AGCCAATGAG GACGCAACGG TCTACACGCT GAACGTGCGC
CAGGGGATTT CCTGGAACAA CGGCGATGCC TTCACGGCCG AAGACGTGGC GGCCAACCTG
ATCGGCTTCT GCGACACAAC CGTCGAAGGC AATTCCATGG CCACCCGCAT GGGCGGTCTG
GTGGACGAAG AGACCGGCCT GGCCCGCGAG GGCGCGATTG AGGTCGTGGA CGATCATACC
GTGCGCGTCA CCTACCCGTC CCCGGACATC ACCTTCGTGC CCGGCGTGGC GGACTACCCC
TCCGCGATCC AGCACCGCGA TCTGATCGGC ACCAACCCGT CTGATCACGG CGTGGGCACC
GGCGCCTATG AGATCACGTC CTATGAGGTG GGTGTCGCCG CGACGCTCTC GCGCAAGGCC
GATCACGAGT ATTGGGGCGA CACATATCTG GATGAAATTG TGTTCGTCGA CCTGGGCCAG
GATCCCGCCG CCTGGTTTGC GGGCGCGGAA GCCGATGAAT TCGACATGAC CTACGAGACC
GTGGGTGAAT TCGTGGACCT CTTCGCCGCC ATCGGTTGGG ATCAGTCCGA AGTTGTGACG
GCGGCCACCG TTGTGGTGCG TCCCAACCAG AACAACGCGC CCTACGACAA CCTTCAGGTG
CGCCAGGCCA TCCAACTGGC CGTGGACAAC CAGGTCTGCC TTGATCTGGG CATCAACGGC
CAGGGCGTGA CGGCGGAAAA CCACCATGTC TGCCCGATCC ACCCGGAATA TGCGGAACTG
CCGCCCCTGA CCCATGATCC CGCAGCCGCC CAGGCGCTGC TGGAGGAATC GGGCCACGCG
GATACAGAGT TCGAGCTGGT CTCCATCGAC GATGATTACC GCAAAAACAC CACCGATGCC
GTGGCTGCGC AGCTGCGTGA CGCGGGCTTT AACGTGACGC GGACGATCAT CCCCGGCTCG
ACGTTCTGGA ACGACTGGAC GTCCTATCCG TTCAGCTCCA CCAACTGGAA CCACCGCGAA
TTGGGCGTGC AGATCCTCAA CCTCGCCTAC CGCTCCGGTG TGCCGTGGAA CGAGTCAGGC
TTTGCCAATG ACGAGTTCGA TGCGCTGCTG ACCGAGGCCA ACGGCATCCA GGACGCCGAT
GCACGCCGTG AGATCATGGC GCAGCTGCAA ACGATCATGC AGGAGCAGGG CGTGACCATT
CAGCCCTACT GGCGCTCGCT CTTCCGGCAC TCGCGTCCGG GTCTCGTGAA CAACGAGATG
CATGCGAAGT TCGAGATCAA CGTGCATTAC CTCGGCTTCG CGGCCTAA
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| Protein sequence | MKDFTHTTTQ VQQQGGLTTH PVAEMYAAEH KAGRLDRREF LVRSTALGLS AAAAYSLIGA
TPAMADGHRA VPAEGGTLRI QQEVRALKDP RTFDWSQMAN VTRGFLEYLI QYNNDGSFEG
ILLESWEANE DATVYTLNVR QGISWNNGDA FTAEDVAANL IGFCDTTVEG NSMATRMGGL
VDEETGLARE GAIEVVDDHT VRVTYPSPDI TFVPGVADYP SAIQHRDLIG TNPSDHGVGT
GAYEITSYEV GVAATLSRKA DHEYWGDTYL DEIVFVDLGQ DPAAWFAGAE ADEFDMTYET
VGEFVDLFAA IGWDQSEVVT AATVVVRPNQ NNAPYDNLQV RQAIQLAVDN QVCLDLGING
QGVTAENHHV CPIHPEYAEL PPLTHDPAAA QALLEESGHA DTEFELVSID DDYRKNTTDA
VAAQLRDAGF NVTRTIIPGS TFWNDWTSYP FSSTNWNHRE LGVQILNLAY RSGVPWNESG
FANDEFDALL TEANGIQDAD ARREIMAQLQ TIMQEQGVTI QPYWRSLFRH SRPGLVNNEM
HAKFEINVHY LGFAA
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