Gene Jann_2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2425 
SymbolrpsI 
ID3934882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2420771 
End bp2421265 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content64% 
IMG OID637904783 
Product30S ribosomal protein S9 
Protein accessionYP_510367 
Protein GI89054916 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.149157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.160414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA CCCTCACTTC TCTCGATGAG CTGAAAGGCT CCGTCGACGG CGTTGACGCT 
GCGGCCCCCG CAGTTGAGAC CATCCATCGT GAGCCGCAGC GCGACGCGCT TGGCCGCTCT
TACGCCACCG GCAAGCGGAA GGACGCGGTC GCCCGTGTCT GGATCAAGCC CGGCTCCGGC
AAGATCACCG TCAATGGCAA GGACATGCCC GTCTATTTCG CGCGTCCCGT GTTGCAGATG
ATGCTGCGCC AGCCCTTCAC CGTCGCCGGT GTGGACGGGG AGTTTGACGT CATGGCAACC
GTCAAGGGCG GCGGCCTGTC CGGTCAGGCC GGTGCGGTCC GCCACGGGGT GTCCAAGGCC
TTGCAGCTTT ATGAACCCTC CCTTCGTGGT GCTCTGAAAG CCGCAGGCTT CCTGACGCGC
GACAGCCGTG TGGTTGAGCG CAAGAAGTTC GGTAAGGCCA AGGCCCGGAA GAGCTTCCAG
TTCTCCAAGC GCTGA
 
Protein sequence
MAETLTSLDE LKGSVDGVDA AAPAVETIHR EPQRDALGRS YATGKRKDAV ARVWIKPGSG 
KITVNGKDMP VYFARPVLQM MLRQPFTVAG VDGEFDVMAT VKGGGLSGQA GAVRHGVSKA
LQLYEPSLRG ALKAAGFLTR DSRVVERKKF GKAKARKSFQ FSKR