Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2425 |
Symbol | rpsI |
ID | 3934882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2420771 |
End bp | 2421265 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637904783 |
Product | 30S ribosomal protein S9 |
Protein accession | YP_510367 |
Protein GI | 89054916 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0103] Ribosomal protein S9 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.149157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.160414 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGAGA CCCTCACTTC TCTCGATGAG CTGAAAGGCT CCGTCGACGG CGTTGACGCT GCGGCCCCCG CAGTTGAGAC CATCCATCGT GAGCCGCAGC GCGACGCGCT TGGCCGCTCT TACGCCACCG GCAAGCGGAA GGACGCGGTC GCCCGTGTCT GGATCAAGCC CGGCTCCGGC AAGATCACCG TCAATGGCAA GGACATGCCC GTCTATTTCG CGCGTCCCGT GTTGCAGATG ATGCTGCGCC AGCCCTTCAC CGTCGCCGGT GTGGACGGGG AGTTTGACGT CATGGCAACC GTCAAGGGCG GCGGCCTGTC CGGTCAGGCC GGTGCGGTCC GCCACGGGGT GTCCAAGGCC TTGCAGCTTT ATGAACCCTC CCTTCGTGGT GCTCTGAAAG CCGCAGGCTT CCTGACGCGC GACAGCCGTG TGGTTGAGCG CAAGAAGTTC GGTAAGGCCA AGGCCCGGAA GAGCTTCCAG TTCTCCAAGC GCTGA
|
Protein sequence | MAETLTSLDE LKGSVDGVDA AAPAVETIHR EPQRDALGRS YATGKRKDAV ARVWIKPGSG KITVNGKDMP VYFARPVLQM MLRQPFTVAG VDGEFDVMAT VKGGGLSGQA GAVRHGVSKA LQLYEPSLRG ALKAAGFLTR DSRVVERKKF GKAKARKSFQ FSKR
|
| |