Gene Jann_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2407 
Symbol 
ID3934864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2407955 
End bp2409418 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content65% 
IMG OID637904765 
Productcarbohydrate kinase, FGGY 
Protein accessionYP_510349 
Protein GI89054898 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.242819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.388769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACA GACTGACCCT TGGGATCGAC GTCGGAACGA CATCCGTGAA GGCCGGTATC 
GTCGACGGGT CCGGGCGTGT CGTCGCCCGG TTCGCGCAAA GCTACCCCAC CTTGCGCCGC
GGATCGGATA TCGCGGAACA GGACCCGGAC GATTGGGTAC GATTGATATC CGATGCGATG
GCGTCCTTCG CGGACTTCGA GATCTCGGCG ATTGGTATCA CGGGTCAGGT CAACACCCAT
GTATTCGTGG ACCGCGAGGG CACGGCATTG TTGCCTGCAA TCTTGTGGCA GGATGGCCGT
GCGGGCGGTG AAGCGGCCGG CCTGGATGCG CGTGTAAGCG CGGCGCAGAA GCAGGCGTGG
TGGGGCGCGC CGATGCCGAT TGATGCCTCC CACGCCTGTT CGCGCATGGC CTGGGTCGCC
CGCCACCACC CCGATATCTG GGAGAAGACG CGATGGGTGA TGCTGCCCAA AGACTATTGC
CTTCTCAAAC TGACGGGGGA GGCCACGACC GACCCAATCT CCAATATCGG CCTTGTGGAC
AACACCCACG CCTATATCGC GGAGGTGTTT GACCTCGTGC CCGGCGCGGC GGACCGCAAG
GTACCGCTGG TGCCGGTCTG CGACGTGGTT GGCACCGTCG CGCAGGGGCC ATTTGCGGGG
GTGCCCGTTG TGTCGGGCAC GATGGATGCC TGGGCGGGCC TGGTCGGCGC GGGCGGGGCG
AAAGACGGCT CCACCGTCTA TCTCAGCGGA ACCAGTGAAA TCCTGGGGAT TTCATCGCAC
GATGTGGTGC CCACGCCCGG CATCATTGTC TTCCCCGAAG CGGATGGCAT CCGGCTGCAC
GCGGCACCGA CGCAATCCGG CGGGGATGCC AAGGTCTGGT TTTCGCAAGC CGGCGGCGTG
TCCCTTGACC AGATGACCGA GCTGGTCGCA CGCACCGAAA GACGCGCGGC GACGCCCCTG
TTCCTGCCCC AGTTGCAGGG AGAGCGCGCG CCGTTATGGG ACGCGGATCT GCGCGCGGCC
TTCCTGGGGG TTGGCCGCCA GACCAATCAG CAGGATCTGG CCCGCGCGGT CTATGAAGGC
GTGGCGATGT CCGCCCGCAT GGCCCTTGAG GCGCTTCAGA AATCGGCGGG CGTTGTCAGT
GACACCATCG CGTGCGGCGG CGGTGGGTTT CAATCCGACC CGTGGGCTCA AATCCGGGCC
GATATCCTGG GTGTCGAGTT GACATGCCTG GCCGCCAAAG ACCCGGGCAT ATTGGGCGCG
GCGGCGATGG CAGCCATCGG CGTGGGGCAC TTCCGGGCCT TCGGGGAGGC CTATGACGCC
CTGGCCGTGT TTGACCGCAC ATTCACCCCA GATCCGGCGT CCCACACCCA TTACAACGAC
CTGTTCGACC TGTACCGGGA CGCGATTGCA GTGAATGCAG ATCTCGGCAA ACGCCTGTCA
AAACTGGATT TCTCGACCGT TTGA
 
Protein sequence
MPNRLTLGID VGTTSVKAGI VDGSGRVVAR FAQSYPTLRR GSDIAEQDPD DWVRLISDAM 
ASFADFEISA IGITGQVNTH VFVDREGTAL LPAILWQDGR AGGEAAGLDA RVSAAQKQAW
WGAPMPIDAS HACSRMAWVA RHHPDIWEKT RWVMLPKDYC LLKLTGEATT DPISNIGLVD
NTHAYIAEVF DLVPGAADRK VPLVPVCDVV GTVAQGPFAG VPVVSGTMDA WAGLVGAGGA
KDGSTVYLSG TSEILGISSH DVVPTPGIIV FPEADGIRLH AAPTQSGGDA KVWFSQAGGV
SLDQMTELVA RTERRAATPL FLPQLQGERA PLWDADLRAA FLGVGRQTNQ QDLARAVYEG
VAMSARMALE ALQKSAGVVS DTIACGGGGF QSDPWAQIRA DILGVELTCL AAKDPGILGA
AAMAAIGVGH FRAFGEAYDA LAVFDRTFTP DPASHTHYND LFDLYRDAIA VNADLGKRLS
KLDFSTV