| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2389 |
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| Symbol | |
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| ID | 3934845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2391229 |
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| End bp | 2391906 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904747 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_510331 |
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| Protein GI | 89054880 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.183953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATACAG ATATACTTAT TGGACGGTCA CCGCAACGAG AACGCCCCCG AAAGCCCTGT
CAGATGCCGA AACACAACGC CGACTCAATC GCCGACGCCC TGCGCAAACG TATTTGTCTG
GAGCCCCCGA CCGCAAGCCT CGTTCTGCAT GAGCAGGCCC TGGCGGAAGA GTTCGAGGTG
TCGCGCACAC CCGTGCGGCA GGCCTTGCAA CGCCTGGCCT ATGAACGCCT TGTGGAGGTT
CGCTCGGGCG TCGGGACCGT GATCTCCCCC CTGAAGGAGG ATGGGCGCGA GATGGATATC
AACCTCGCCT CCGCCCTGCT GGATGTGGCC GCCGACATCG AGGGCGACCG CGCCCTGTCC
ATCGAGTCGA ACGCATTCAT CATCGCGTTG GAGCAACAGG TCAGCGCGGC GACCGCCCTG
GATCTGGACA CGAATTACAC CATCCGCTCC ACGTTGATGG GGATCGTCAC CCGCGAAATG
TCCAATGATA TCCTGGCAGA GGCGCTCAAG GCGGCACTTT GGCGGTTGTT TCGCTGGCGT
ATGGCGGATG CGGCGGCCGA GCCGTCGGGC ATTGACGCAC GCCTGCGCGA GGTGATCGAG
CGGATGGCGG CCGCCACCAA GGTCGGCACG GTCCGCGCGC TTTTGCAGGC GCAGCATTCC
CCCTCCGCGC CCGACTGA
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| Protein sequence | MYTDILIGRS PQRERPRKPC QMPKHNADSI ADALRKRICL EPPTASLVLH EQALAEEFEV
SRTPVRQALQ RLAYERLVEV RSGVGTVISP LKEDGREMDI NLASALLDVA ADIEGDRALS
IESNAFIIAL EQQVSAATAL DLDTNYTIRS TLMGIVTREM SNDILAEALK AALWRLFRWR
MADAAAEPSG IDARLREVIE RMAAATKVGT VRALLQAQHS PSAPD
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