| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2346 |
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| Symbol | |
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| ID | 3934802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2353027 |
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| End bp | 2354211 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904704 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_510288 |
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| Protein GI | 89054837 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.222275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.578852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCT TTACGACAAC AACAACCGCG ATCGTCGCGC TTCTTGCCAC CACCACCCTC
GCAACCGCCG GTGGCGTGGA ACGCCAGGCC CAGAGCCCTG CGATCCTGTT TGAGGATGGC
ACCTACGTCG AGCTTGGGTT CACGACCGTT AACCCCGACG TTTCTGGCGT TCAACAGCGG
ACCGCTGGGG CGACGTCTTT GGCCGGGTCC ACCTCGGGCG ACATCGCGCC GTCCTACAAC
TACGCAACCC TGTCCTATCG CCAGGATATC ACCGAAGAGC TTTCATTTGC GTTGATCTAC
GACCAGCCGA TTGGTGCGGA TGTGAATTAC ATGCCCAACG GCGGTTCGGG CTACCTTTAT
GGTTCGGGCG CAGGGTCCCA GGCTGAAATC CGGTCTCAGG CTCTGACCCT TGCGGCGCGC
TACGAGTTCA CCGACCGCAT CTCTGCCTAT GCAGGCCTGC GGGTTGTGAC CGCTGAGGGT
ACAGTATCGT TGTTCAACGG TTCTGGCGCG CCCGCAGGGT CGCCCAACCG GTACACCATG
GAAGCGGAAA GCGACGCCGA ACTTGGCTTC ATGATCGGTG CGGCCTACGA GATCCCGGAC
ATCGCCCTGC GCGTGGCCTT GACCTATTAC TCCGAAACCA ACCACACGTT CACGGGCACC
GAAGGCATCA TCACGCCGAC CGGGGCCGTC GTGACCGGCC CGATGGAGTT TGAAACGACG
ATCCCGCAGC AGGTCCTGCT TGAGGCGCAA ACCGGCGTCG CTGAGGGCAC GCTTGTTTTC
GGCTCGATCC GTTGGACCGA ATGGACCGAG TTTGATATCG CCCCCCCGGC GTTCAACGCG
GCCACCGGCG GTTCGCTCGT CGACTACGAC GACGATGTCT GGACCTACAC CATCGGTGGC
GCGCGGGTCC TGAACGAACA ATGGACCGCT CTCGCATCGC TGACCTATGA GGCCTCTCAG
GGTGGCTTTT CGGGCAACCT CGGGCCGACC GACGGACGGA CTTCCGTTGG CCTTGGTGCG
CGCTACACCC AGGGCAGCAT GACCGTCACC GGCGGCATCA ACTATACCAT GGTGGGCGAC
GCGACGACTG AAGCCCCCGG TCCGTTCCCG GCCGGCCTCG ACTTTGGTGA ATTCGCGGAC
AACAGCTCCC TTGCCTTTGG CTTGCGGGTC GGTTTCTCCT TCTGA
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| Protein sequence | MTRFTTTTTA IVALLATTTL ATAGGVERQA QSPAILFEDG TYVELGFTTV NPDVSGVQQR
TAGATSLAGS TSGDIAPSYN YATLSYRQDI TEELSFALIY DQPIGADVNY MPNGGSGYLY
GSGAGSQAEI RSQALTLAAR YEFTDRISAY AGLRVVTAEG TVSLFNGSGA PAGSPNRYTM
EAESDAELGF MIGAAYEIPD IALRVALTYY SETNHTFTGT EGIITPTGAV VTGPMEFETT
IPQQVLLEAQ TGVAEGTLVF GSIRWTEWTE FDIAPPAFNA ATGGSLVDYD DDVWTYTIGG
ARVLNEQWTA LASLTYEASQ GGFSGNLGPT DGRTSVGLGA RYTQGSMTVT GGINYTMVGD
ATTEAPGPFP AGLDFGEFAD NSSLAFGLRV GFSF
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