| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2297 |
|---|
| Symbol | |
|---|
| ID | 3934753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2302848 |
|---|
| End bp | 2303189 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637904655 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_510239 |
|---|
| Protein GI | 89054788 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.718844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAC GGATAGACCC GGGCATACGC TCGTCGAAGA TCGTGAAACA CAATGGCGTG
GTCTATCTGA CCGGCCAGGT CGGCGAGGGC GCTGATATCA CCGAGCAGAC CGTCGAATGC
CTGGCCCGTG TCGATGCGCT GCTGGAGCAG GCTGGGTCCT CACGGGAACA TATGTTGCAG
GTCACGATCT GGCTGGCTGA CATGGCCGAC TTCGCCGCGA TGAATGAGGT TTGGAACGCC
TGGGTGCCCC AGGGCCATGC ACCGGCGCGC GCCTGCGGTG AAGCCAAACT GGCCCGAGAT
GTTCTGAAAG TGGAAATGAT CGTCACGGCG GCCGTGGCAT GA
|
|---|
| Protein sequence | MIERIDPGIR SSKIVKHNGV VYLTGQVGEG ADITEQTVEC LARVDALLEQ AGSSREHMLQ
VTIWLADMAD FAAMNEVWNA WVPQGHAPAR ACGEAKLARD VLKVEMIVTA AVA
|
|---|
| |