Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2273 |
Symbol | |
ID | 3934728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2279714 |
End bp | 2280193 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637904630 |
Product | MarR family transcriptional regulator |
Protein accession | YP_510215 |
Protein GI | 89054764 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.123846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCACG ACCATTCAGC CCCGACACCA AGACCTCGGC GCCCATTGGA AGACCGCGTG TCGTTTCTGA CCCACAGGAT CAACGCGCGG TTGCAGCAGT TGAGCACGCC GATCCTGACA CCGCTGAAGC TCGACCTCTA TTCGTCCCGG ATCATCGTGG CGCTGGCCGA GCGGGGACCA CTGAAAGTTG GACAATTGGT CGATCTCATG GCCCTGCCCC AATCCACGAT GTCCCATCAG TTGAAGCGAA TGGAGAAAGA CGGCTACGTG CAGCGCACGC GTTCGGACAC GGATAACCGC ACGGTTGTCA TCACGCTGAC GGACGAGGGT GAAACGGTGT CGGAGACCTG TAATCGCTGG AGCGATCAGG TGCTGAATTC GGTGTCCGAG GAATTGTCCG ACAGTGAGAT CGAAGCGCTG AGCGCCCTGT TACAGCGCGT CTTTAAGAGC CTCCCGCAGG AGGGTGACAT CCAGCTCTGA
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Protein sequence | MSHDHSAPTP RPRRPLEDRV SFLTHRINAR LQQLSTPILT PLKLDLYSSR IIVALAERGP LKVGQLVDLM ALPQSTMSHQ LKRMEKDGYV QRTRSDTDNR TVVITLTDEG ETVSETCNRW SDQVLNSVSE ELSDSEIEAL SALLQRVFKS LPQEGDIQL
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