| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2263 |
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| Symbol | |
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| ID | 3934718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2271424 |
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| End bp | 2272533 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904620 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_510205 |
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| Protein GI | 89054754 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0102579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATT TGAAACTTCT GGCGACCGCA TCCGCGCTTG CCCTGGCGAC ACCCGCGATG
GCAGACGATG TCATCATCGG CGTCGTGGTC TCGACCACAT CGACCTATGC CTTTGTGGGG
CAACCCCTGG TCAATGGCAT GCGCCTCGCC GCGGATGAGC TGACCGCCGG AGACGGCTGG
GGCGGCCACA CCGTCGAGAT CCTCTATGAG GACAACCGAT CCGAGCGTCA GGAAGCTATC
GCCCTGATCA CCCGCATGGC GGTGTCTGAA GACGCCGACA TCATCATCGG GCCTATCGCA
AGCTCGGAAG CCATGGCGAC CGGCCCCGTG GCCGTTGATC TGGAAATCCC GATGTTCACC
ACCGCGACCT CGCCTGCCGT GTTGGATGCC GGACCTTGGG TCTTCAAATC TACTGAAACG
GCTGACGCCT ATATGGCCCC GGTGGCCGAG CATGTTGTGG GTCTTGCGCC CGAGGATTGC
TTCCTCGTCT CGATCCGCGA CAACGAAGGC TACATCCTGC AGCGCGATGT GTTCCGGGGC
ATCCTGGAAG ATGGCGGCGT GACGATCGCG GGCGACGAGA CGGTGCTGGC GGCAGACACC
GACTTCACGG CGCTGTCCAC GCTGATCGTG AATTCCGACG CCGATTGTCT GTTCGTGACC
GCTCCGCCCG AGCAGGCCGC CAACATTATC ATCCAGTCCC GTCAGGCGGG TCTCAACCCG
GATACGATCC TGGCCAGCGA TTCCGGTGCA GGCTCGCAAA ACTACATCGA CGCGGGCGGC
AGTGCTATTG AAGGCACGTT TTTCCCGGCC AGCTTTGTCG CGGATGCGTC CGAAAGCGCA
ATGGCATTCT CGACCGCCTA TGTCGATGCC TATGACATTG ATCCCGATAT CTGGGCGGCC
ACGGGCTACA CGATGATGCA GACTGTCGCT AATGCGATCC GCAACGCAGG CGATGATGTA
AACCGGGAAA CGTTGCGAGA GGCCATGGCC GCCACGCGTG ATCTTCCGGT CGTGATGGGT
CAGGGAACGC TGACTTTTGA CGAGAACCGC ATACCCATGA TGGGCGGTAT CGTCATGCAA
ATTCGTGACG GCGCACGCGT CCTTCCGTAA
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| Protein sequence | MKHLKLLATA SALALATPAM ADDVIIGVVV STTSTYAFVG QPLVNGMRLA ADELTAGDGW
GGHTVEILYE DNRSERQEAI ALITRMAVSE DADIIIGPIA SSEAMATGPV AVDLEIPMFT
TATSPAVLDA GPWVFKSTET ADAYMAPVAE HVVGLAPEDC FLVSIRDNEG YILQRDVFRG
ILEDGGVTIA GDETVLAADT DFTALSTLIV NSDADCLFVT APPEQAANII IQSRQAGLNP
DTILASDSGA GSQNYIDAGG SAIEGTFFPA SFVADASESA MAFSTAYVDA YDIDPDIWAA
TGYTMMQTVA NAIRNAGDDV NRETLREAMA ATRDLPVVMG QGTLTFDENR IPMMGGIVMQ
IRDGARVLP
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