| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2256 |
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| Symbol | |
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| ID | 3934711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2262840 |
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| End bp | 2263250 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904613 |
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| Product | BadM/Rrf2 family transcriptional regulator |
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| Protein accession | YP_510198 |
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| Protein GI | 89054747 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.214948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGAA ACAGCCGCCT TTCCCTTGCC CTGCACACCC TTGGCCATAT GGCCGGGGCG
CCGGACAAGT TGCGGACCTC CGCCGACATC GCAGACCATG CGGGCACCAA TCCGGTTGTG
GTCCGGCGTG TGCTGGGGCG GCTGCGGGAG GCAGGTTTGC TGATTTCCGA GAAGGGCCAT
GCGGGGGGGT GGCGTCTGGC GCGCGCGCCG CAATCCATCA CATTGGCCGA TGTCTATCTG
GCGCTGGATG AAAGTCTGGT AGCGAGTGTC GAGAGTGACG ATGTCCCAAG CTGCTCGGTG
GAGCACGCGT TGCATCGCAG GGTGTCGAGC GTGATGAAAG ACATCGAGCA AAGCCTGATT
GAGCGGCTCG GGGAAACGAC GATCTCGGAA GTGCGGGGGC TGCCATCTTG A
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| Protein sequence | MKRNSRLSLA LHTLGHMAGA PDKLRTSADI ADHAGTNPVV VRRVLGRLRE AGLLISEKGH
AGGWRLARAP QSITLADVYL ALDESLVASV ESDDVPSCSV EHALHRRVSS VMKDIEQSLI
ERLGETTISE VRGLPS
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