Gene Jann_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2250 
Symbol 
ID3934704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2258454 
End bp2259203 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content67% 
IMG OID637904607 
Producthypothetical protein 
Protein accessionYP_510192 
Protein GI89054741 
COG category[C] Energy production and conversion 
COG ID[COG3411] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.478876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCCGAC CCGCCCTGCG GGAGGCACAG GTGCACGCGA CCCTCTATCT GATCTCGCAA 
TCCTATGTGA GCGGGCGCAA CCTGTCCGGC GTTATGGCCG GGCTCTGTGC AGCCACCGAT
GGGCCTGCCT CCGCCGTGCG GCTGGAACGT GACGGCGCGG GGCTGTGGCG GGCGCTGACC
CAATGGATCG CCGATGGCGC GACCGAGATC ACCCTGCGCC CCGTGGGCCT GCCGTTCTCC
GACAGTCTGA TGGCCTGGCT GCCCGGCGCC GCAGGGGACT GGCTGGCGCG GCCAGAGAAC
ATCGGCGTTC AGGTGTGGCT CGCGCAGGAT GCGGCACAGG CCAGCACGGT GTTATCTGCC
ATCGCCCAGG CCCCGGTCAC CCGCACGCCT ATCCCCCCAA AACCCTTCGG CAGCCTCGGC
AAGGGATGGG ATGCGCCCCC CGCCCATCGC CACCATGTGC TCGTCTGCAC AGGCCCCCGG
TGCCATCTGC GCGATGCGCC CGATCTGCTT GGGCTGCTCA AGGCCGAAAT AACCCACCTG
TCCCTGGGCG ATGACTGCCT GGTGACGGCG ACGGGATGTC TTTTTCCCTG CAATGCAGGC
CCGGTCGTGG TGGTCTATCC GCGGGGCCAA TGGTTCCAGC TTCCCGATGC CATGGCCGTG
CGGCGCTTTG CCGATGTCGT GCTGCGCCAG AACAGGCCCC TTCCCGAATT TCAGACCTTC
AAGACAGGAT CCCCCTATGA ACCCGCGTGA
 
Protein sequence
MARPALREAQ VHATLYLISQ SYVSGRNLSG VMAGLCAATD GPASAVRLER DGAGLWRALT 
QWIADGATEI TLRPVGLPFS DSLMAWLPGA AGDWLARPEN IGVQVWLAQD AAQASTVLSA
IAQAPVTRTP IPPKPFGSLG KGWDAPPAHR HHVLVCTGPR CHLRDAPDLL GLLKAEITHL
SLGDDCLVTA TGCLFPCNAG PVVVVYPRGQ WFQLPDAMAV RRFADVVLRQ NRPLPEFQTF
KTGSPYEPA