| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2175 |
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| Symbol | |
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| ID | 3934629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2180867 |
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| End bp | 2181781 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904532 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_510117 |
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| Protein GI | 89054666 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.823288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTGGG ACAAGTTGCG CATCTTTCAT GCGGTGGCCT CGGCGGGGTC CCTGACCCAT
GCGGGCGATA CGCTGCATCT CAGCCAATCC GCCGTGTCTC GTCAGATCCG CGCGCTGGAG
GAAGGCCTTG ATACAACGCT GTTTCACCGC CATGCGCGGG GTCTGATCCT GACGGAACAG
GGTGAGTTGT TGTTTGATGC CACACGCCAC ATGACCAAGC GCCTTGATGC CGCGTCTGCG
CGCATTCGCG ACAGTGAGGA AGAGGTCTTT GGCGAGCTGC GGGTGACGAC GACCATTGGC
TTCGGCTCCC TCTGGCTGGC CCCGCGTCTG CCCGCCCTTT ACGAGAAATA CCCCGATCTC
AAGATCGACC TGATGCTGGA AGAACGCCTG CTGGATCTGC CGATGCGCGA GGCCGACGTG
GCCATCCGCA TGAAAGAGCC GTCGCAGGCC GACCTGATCC GCCGCCGCCT GATGACGATC
AACATGCGTC TTTATGCGAC GCCCTCCTAC ATCGAAAAGC ACGGGATGCC CGACAGCATT
CACGCCTTGG GTAATCATCG CCTGATCTCA CAGAACGCGG CGGCCGCACA GGTCAGCGCG
GGGGCCATTC TGGTGCGCGA ACTGCTCAGC TATGATGTGG GCTCGACCCT TGCGGTGAAC
AATTATTTCG GTGTCCTGCA GGCCGTCATC CATGATCTTG GTATCGGGGT GTTGCCTGAT
TATCTAATCC AGGATTTCCC CGATCTGGTC CGGGTGCTGC CGGAGGTTGA ATCCGCAGAA
GTGCCGGTCT TCCTCGCCTA CCCCGAGGAG TTGCGCCAAT CCCGCCGGAT CGAGGTGTTC
CGCGATTTTG TCAGCGAAGA GGTCATCGCC TATCGCCGCC GACAACGGGA GGCTGAGGCG
ATTACGGCTG CCTAA
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| Protein sequence | MDWDKLRIFH AVASAGSLTH AGDTLHLSQS AVSRQIRALE EGLDTTLFHR HARGLILTEQ
GELLFDATRH MTKRLDAASA RIRDSEEEVF GELRVTTTIG FGSLWLAPRL PALYEKYPDL
KIDLMLEERL LDLPMREADV AIRMKEPSQA DLIRRRLMTI NMRLYATPSY IEKHGMPDSI
HALGNHRLIS QNAAAAQVSA GAILVRELLS YDVGSTLAVN NYFGVLQAVI HDLGIGVLPD
YLIQDFPDLV RVLPEVESAE VPVFLAYPEE LRQSRRIEVF RDFVSEEVIA YRRRQREAEA
ITAA
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