| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2157 |
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| Symbol | |
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| ID | 3934611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2165382 |
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| End bp | 2166713 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904514 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_510099 |
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| Protein GI | 89054648 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.446394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG CAACAGCCTC CGCCCCCTCC AGCGTGAACA CCAAGAATAT CATGCTGTTC
GCCCTGGTGG CGATCCTCTT CCTCGGCACC GGCTTCGTGC AATCCTGGAA CACGGCGCTG
ACGATCTTCA ACATGGGCCT GATCAGCTGC ATCATGGCGC TTGGCGTAAA CATGCAATGG
GGTTATGCGG GCCTCTTCAA CGTTGGCATC ATGGGCTTCG TGGCGCTCGG CGGCCTCGCC
ACGGTGCTCG TCTCGGTCGA ACCGGTCCCC GAGGCGTGGA GCGCGGGCGG CCTGCGCACC
TTGATCGGCC TGGTCCTCGG CGCCTTGACC ATCGTCGGCG CGATCCTTCT GTGGAACGCC
ATGCCGAAGG GCCGATTGCG CGGCATCGCC ATGCTGATCG TCCTGATCAT CGGCTTCACC
CTCTTCCGCC GTGTCTTTGA CGTAGGCGTG GATGCGGTGG AATCCATCGA TCCGGCCTCC
ACCGGGTTCC TCGGCGGCCT TGGCCTTCCC GTTTTGCTGG CCTGGCCCGT TGGTGGGCTG
CTGGCTGCCG GGGCCGCCTG GATCATCGGC AAGACGGCCC TTGGCCTGCG GTCCGATTAT
CTGGCCATCG CCACCCTCGG TATTGCAGAG ATCATCATCG CCATCCTCAA GAATGAAGAC
TGGCTGGCGC GCGGCGTGAA AAACGTCACC GGCATTGAGC GTCCCGTCCC CTATGAGGTG
GATCTGCAAG CCTCAGACGG CTTCCTGAGC TTCGCCACCA ACATCGGCGC GGACCCGGTT
ACCGCCTCCA CGATTACCGT CAAGCTGCTC TATGCCGCGC TGTTCCTGAT CGTTGTGGGC
CTGCTGATCT GGCTGTCGGA AAAGGCCTGG AACTCCCCCT GGGGCCGGAT GATGCGCGCG
ATCCGCGACA ATGAAGTCTC GGCCTCGGCC ATGGGCAAGG ACGTCAAGGC GCGGCATCTG
CAGATTTTCA TCCTCGGCTC CGCCATTTGC GGCATTGCTG GTGCGATGAT GACCACGCTC
GACAGCCAGC TGGTGCCCGG CACCTACCAA CCCCTGCGGT TTACGTTCCT GATCTGGGTC
ATGGTGATCG TCGGCGGCTC CGGCAACAAT TGGGGCGCGG TCCTGGGCGG CTTCCTGATC
TGGTGGCTGT GGGTGCAGGT GGAACCCCTG GGCCTTCTGC TGATGCAAAC CATCACGGCG
GGCATGGATG ATGGCTATTG GCTGCGGGAG CATCTGCTGG ATTCAGCCGC CCATATGCGC
CTGTTGACGA TGGGCATGAT CCTCCTGCTG GTCCTGCGCT TCAGCCCCCG TGGCCTGATC
CCGGAACGGT AA
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| Protein sequence | MSDATASAPS SVNTKNIMLF ALVAILFLGT GFVQSWNTAL TIFNMGLISC IMALGVNMQW
GYAGLFNVGI MGFVALGGLA TVLVSVEPVP EAWSAGGLRT LIGLVLGALT IVGAILLWNA
MPKGRLRGIA MLIVLIIGFT LFRRVFDVGV DAVESIDPAS TGFLGGLGLP VLLAWPVGGL
LAAGAAWIIG KTALGLRSDY LAIATLGIAE IIIAILKNED WLARGVKNVT GIERPVPYEV
DLQASDGFLS FATNIGADPV TASTITVKLL YAALFLIVVG LLIWLSEKAW NSPWGRMMRA
IRDNEVSASA MGKDVKARHL QIFILGSAIC GIAGAMMTTL DSQLVPGTYQ PLRFTFLIWV
MVIVGGSGNN WGAVLGGFLI WWLWVQVEPL GLLLMQTITA GMDDGYWLRE HLLDSAAHMR
LLTMGMILLL VLRFSPRGLI PER
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