| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2156 |
|---|
| Symbol | |
|---|
| ID | 3934610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2164851 |
|---|
| End bp | 2165300 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637904513 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_510098 |
|---|
| Protein GI | 89054647 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.309687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCAAG ATAGCGACAT CACCGGAGAG GTATTTGGTT TCTTTACCGA AATCGGGATC
ATAAACCAAT TGTCAACGGC AATGCTGGCC AAGAGCCTGC CGGACGGTGT GCATCCGTCA
CACTTTTCAA TCCTGAACCA TCTGGCGCGC TTGGGGGACG GCAAGCCCCC CCTGCGCATC
GCCTCGGCGA TGCAGGTGAC CAAGAATACC ATGACCCATT CGCTGAAAAA ACTTGAGGAT
CGCGGGTATA TCGATGTCCA GCCGGACCCC GATGACGGGC GCGGCAAGCT TGTCTTCCTG
ACGGCAAAAG GGCGCCGCTT TCGCGAGGAG GCGATCACCT CGGTGAGCGC GCATATCATG
CGGATCATCG GAGAGGATCA ACTGACGATC ATGCGCGGTA TCCGGGGTGG GCTTGAGCAG
ATACGGGAAC ATCTGGACAA CAACAGGTAG
|
|---|
| Protein sequence | MSQDSDITGE VFGFFTEIGI INQLSTAMLA KSLPDGVHPS HFSILNHLAR LGDGKPPLRI
ASAMQVTKNT MTHSLKKLED RGYIDVQPDP DDGRGKLVFL TAKGRRFREE AITSVSAHIM
RIIGEDQLTI MRGIRGGLEQ IREHLDNNR
|
|---|
| |